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- Update requirements.txt
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requirements/requirements.txt

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# torch installation
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--extra-index-url https://download.pytorch.org/whl/cu118; sys_platform != "darwin"
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albumentations>=1.3.0
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albumentations>=1.3.0, <=1.4.21
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bokeh>=3.1.1, <3.6.0
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Click>=8.1.3
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defusedxml>=0.7.1
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filelock>=3.9.0
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flask>=2.2.2
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flask-cors>=4.0.0
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glymur>=0.12.7
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imagecodecs>=2022.9.26
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joblib>=1.1.1
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jupyterlab>=3.5.2
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matplotlib>=3.6.2
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numba>=0.57.0
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Click>=8.1.3, <=8.1.7
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defusedxml>=0.7.1, <=0.7.1
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filelock>=3.9.0, <=3.16.1
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flask>=2.2.2, <=3.1.0
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flask-cors>=4.0.0, <=5.0.0
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glymur>=0.12.7, <=0.13.6
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imagecodecs>=2022.9.26, <=2024.9.22
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joblib>=1.1.1, <=1.4.2
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jupyterlab>=3.5.2, <=4.3.2
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matplotlib>=3.6.2, <=3.9.3
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numba>=0.57.0, <=0.60.0
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numpy>=1.23.5, <2.0.0
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opencv-python>=4.6.0
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openslide-python>=1.2.0
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pandas>=2.0.0
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pillow>=9.3.0
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pydicom>=2.3.1 # Used by wsidicom
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pyyaml>=6.0
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requests>=2.28.1
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scikit-image>=0.20
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scikit-learn>=1.2.0
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scipy>=1.8
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shapely>=2.0.0
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SimpleITK>=2.2.1
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sphinx>=5.3.0
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tifffile>=2022.10.10
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timm>=1.0.3
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torch>=2.1.0
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torchvision>=0.15.0
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tqdm>=4.64.1
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umap-learn>=0.5.3
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wsidicom>=0.18.0
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zarr>=2.13.3
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opencv-python>=4.6.0, <=4.10.0
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openslide-python>=1.2.0, <=1.4.1
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pandas>=2.0.0, <=2.2.3
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pillow>=9.3.0, <=11.0.0
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pydicom>=2.3.1, <=3.0.1 # Used by wsidicom
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pyyaml>=6.0, <=6.0.2
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requests>=2.28.1, <=2.32.3
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scikit-image>=0.20, <=0.24.0
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scikit-learn>=1.2.0, <=1.5.2
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scipy>=1.8, <=1.14.1
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shapely>=2.0.0, <=2.0.6
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SimpleITK>=2.2.1, <=2.4.0
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sphinx>=5.3.0, <=8.1.3
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tifffile>=2022.10.10, <=2024.9.20
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timm>=1.0.3, <=1.0.12
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torch>=2.1.0, <=2.5.1
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torchvision>=0.15.0, <=0.20.1
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tqdm>=4.64.1, <=4.67.1
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umap-learn>=0.5.3, <=0.5.7
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wsidicom>=0.18.0, <=0.22.0
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zarr>=2.13.3, <=2.18.3

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