Merge pull request #211 from ToFuProject/devel

Prepare 0.0.48-49

Author: Didou09

datastock/_class2.py

@@ -629,17 +629,20 @@ def connect(self):
                         v0['handle'].parent(),
                     )
                 except Exception as err:
-                    error = err
+                    error = "1\n" + str(err)
             elif hasattr(v0['handle'], 'parent'):
                 try:
                     v0['handle'].manager.toolbar.__init__(
                         v0['handle'],
                         v0['handle'].parent(),
                     )
                 except Exception as err:
-                    error = True
+                    if "can't initialize an object twice" in str(err):
+                        pass
+                    else:
+                        error = "2\n" + str(err)
             else:
-                error = True
+                error = "3"
 
             if error is not False:
                 import platform
@@ -648,6 +651,7 @@ def connect(self):
                 lstr0 = [f"\t- {k1}" for k1 in dir(v0['handle'])]
                 lstr1 = [f"\t- {k1}" for k1 in dir(v0['handle'].manager.toolbar)]
                 msg = (
+                    "Problem with connect()\n"
                     f"platform: {platform.platform()}\n"
                     f"python: {sys.version}\n"
                     f"backend: {plt.get_backend()}\n"
@@ -657,7 +661,7 @@ def connect(self):
                     + "\n".join(lstr1)
                 )
                 if error is not True:
-                    msg += '\n' + str(err)
+                    msg += '\n' + str(error)
                 warnings.warn(msg)
 
             self._dobj['canvas'][k0]['cid'] = {
@@ -1393,4 +1397,4 @@ def on_close(self, event):
 
 __all__ = [
     sorted([k0 for k0 in locals() if k0.startswith('DataStock')])[-1]
-]
+]

datastock/_generic_check.py

@@ -362,8 +362,6 @@ def _check_dict_valid_keys(
                     var[k0] = None
                     continue
 
-            vv = var.get(k0)
-
             # routine to call
             if any([ss in v0.keys() for ss in lkarray]):
                 var[k0] = _check_flat1darray(
@@ -610,7 +608,7 @@ def _check_all_broadcastable(
         ndim = lndim[0]
 
     else:
-        lstr = [f"-t {k0}: {v0}" for k0, v0 in dndim.items()]
+        lstr = [f"\t- {k0}: {v0}" for k0, v0 in dndim.items()]
         msg = (
             "Some keyword args have non-compatible dimensions:\n"
             + "\n".join(lstr)
@@ -675,48 +673,6 @@ def _check_all_broadcastable(
 #                   Utilities for plotting
 # #############################################################################
 
-# DEPRECATED
-# def _check_inplace(coll=None, keys=None):
-    # """ Check key to data and inplace """
-
-    # # -----------------------------
-    # # keys of data to be extracted
-    # # ----------------------------
-
-    # if isinstance(keys, str):
-        # keys = [keys]
-    # keys = _check_var_iter(
-        # keys, 'keys',
-        # default=None,
-        # types=list,
-        # types_iter=str,
-        # allowed=list(coll.ddata.keys()),
-    # )
-
-    # # ----------------------
-    # # extract sub-collection
-    # # ----------------------
-
-    # lk0 = list(keys)
-    # for key in keys:
-
-        # # Include all data matching any single ref
-        # for rr in coll._ddata[key]['ref']:
-            # for k0, v0 in coll._ddata.items():
-                # if v0['ref'] == (rr,):
-                    # if k0 not in lk0:
-                        # lk0.append(k0)
-
-        # # include all data matching all refs
-        # for k0, v0 in coll._ddata.items():
-            # if v0['ref'] == coll._ddata[key]['ref']:
-                # if k0 not in lk0:
-                    # lk0.append(k0)
-
-    # coll2 = coll.extract(lk0)
-
-    # return keys, coll2
-
 
 def _check_dax(dax=None, main=None):
 
@@ -844,7 +800,7 @@ def _check_lim(lim):
     if len(dfail) > 0:
         lstr = [f"\t- lim[{ii}]: {vv}" for ii, vv in dfail.items()]
         msg = (
-            "The following non-conformities in lim have been identified:\n"*
+            "The following non-conformities in lim have been identified:\n"
             + "\n".join(lstr)
         )
         raise Exception(msg)
@@ -900,7 +856,6 @@ def _apply_lim(lim=None, data=None, logic=None):
     return ind
 
 
-
 def _apply_dlim(dlim=None, logic_intervals=None, logic=None, ddata=None):
 
     # ------------
@@ -960,6 +915,7 @@ def _apply_dlim(dlim=None, logic_intervals=None, logic=None, ddata=None):
             lstr = [f"\t- {k0}: {v0}" for k0, v0 in dfail.items()]
             msg = (
                 "The following keys have non-compatible shapes:\n"
+                + "\n".join(lstr)
             )
             raise Exception(msg)
 
@@ -1021,11 +977,6 @@ def _apply_dlim(dlim=None, logic_intervals=None, logic=None, ddata=None):
 
 def _check_cmap_vminvmax(data=None, cmap=None, vmin=None, vmax=None):
     # cmap
-    c0 = (
-        cmap is None
-        or vmin is None
-        or vmax is None
-    )
     if cmap is None or vmin is None or vmax is None:
         nanmax = np.nanmax(data)
         nanmin = np.nanmin(data)

datastock/version.py

@@ -1,2 +1,2 @@
 # Do not edit, pipeline versioning governed by git tags!
-__version__ = '0.0.47'
+__version__ = '0.0.49'

pyproject.toml

@@ -1,4 +1,64 @@
+[project]
+name = "datastock"
+license = {file = "LICENSE"}
+dynamic = ["version"]
+description = "Generic handler for multiple heterogenous numpy arrays and subclasses"
+readme = "README.md"
+requires-python = ">=3.6"
+authors = [
+  {name = "Didier VEZINET", email = "[email protected]"},
+]
+maintainers = [
+  {name = "Didier VEZINET", email = "[email protected]"},
+]
+keywords = ["data", "analysis", "interactive", "heterogeneous arrays", "numpy", "Collection"]
+classifiers = [
+  # How mature is this project? Common values are
+  #   3 - Alpha
+  #   4 - Beta
+  #   5 - Production/Stable
+  "Development Status :: 5 - Production/Stable",
+
+  # Indicate who your project is intended for
+  "Intended Audience :: Science/Research",
+
+  # Specify the Python versions you support here.
+  "Programming Language :: Python :: 3",
+  "Programming Language :: Python :: 3.6",
+  "Programming Language :: Python :: 3.7",
+  "Programming Language :: Python :: 3.8",
+  "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+]
+dependencies = [
+	"numpy",
+    	"scipy",
+    	"matplotlib",
+    	"astropy",
+]
+
+
 [build-system]
-requires = ["setuptools>=40.8.0",
-	    "wheel",
-	    ]
+requires = [
+	"setuptools>=40.8.0, <64",
+	"wheel",
+	"Cython>=0.26",
+	"numpy",
+]
+
+[dependency-groups]
+dev = [
+	"pytest",
+]
+
+[project.optional-dependencies]
+linting = [
+  'ruff'
+]
+formatting = [
+  'ruff'
+]
+
+[project.entry-points."datastock"]
+datastock = "scripts.main:main"

scripts/__init__.py

@@ -0,0 +1,77 @@
+#!/usr/bin/env python
+
+# Built-in
+import os
+
+
+###################################################
+###################################################
+#       DEFAULTS
+###################################################
+
+
+_PATH_HERE = os.path.dirname(__file__)
+
+
+###################################################
+###################################################
+#       function
+###################################################
+
+
+def main(
+    verb=None,
+    envvar=None,
+    path=None,
+    warn=None,
+    force=None,
+    ddef=None,
+):
+    """ Print version """
+
+    # --------------
+    # Check inputs
+    # --------------
+
+    kwd = locals()
+    for k0 in set(ddef.keys()).intersection(kwd.keys()):
+        if kwd[k0] is None:
+            kwd[k0] = ddef[k0]
+    verb, path = kwd['verb'], kwd['path']
+
+    # verb, warn, force
+    dbool = {'verb': verb}
+    for k0, v0 in dbool.items():
+        if v0 is None:
+            dbool[k0] = ddef[k0]
+        if not isinstance(dbool[k0], bool):
+            msg = (
+                f"Arg '{k0}' must be a bool\n"
+                f"\t- provided: {dbool[k0]}\n"
+            )
+            raise Exception(msg)
+
+    # --------------
+    # Fetch version from git tags, and write to version.py
+    # Also, when git is not available (PyPi package), use stored version.py
+
+    pfe = os.path.join(path, 'version.py')
+    if not os.path.isfile(pfe):
+        msg = (
+            "It seems your current install has no version.py:\n"
+            f"\t- looked for: {pfe}"
+        )
+        raise Exception(msg)
+
+    # --------------
+    # Read file
+
+    with open(pfe, 'r') as fh:
+        version = fh.read().strip().split("=")[-1].replace("'", '')
+    version = version.lower().replace('v', '').replace(' ', '')
+
+    # --------------
+    # Outputs
+
+    if dbool['verb'] is True:
+        print(version)