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README.md

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@@ -182,7 +182,7 @@ names(test@ident) <- rownames(test@meta.data)
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pbmc_small@meta.data$ident <- as.factor(partition)
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```
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Suerat objects contain an SNN graph that can be passed directly to the igraph method. For example
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Seurat objects contain an SNN graph that can be passed directly to the igraph method. For example
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```R
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library("Seurat")

vignettes/run_bipartite.Rmd

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@@ -216,7 +216,7 @@ plot(bipartite_graph, vertex.color = node.cols, layout = layout.kamada.kawai)
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```
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#### Maxiumum Community Size Parameter
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#### Maximum Community Size Parameter
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The `resolution`max_comm_size` parameter applies on bipartite graphs to fine-tuning the size of clusters detected.
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vignettes/run_multiplex.Rmd

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@@ -364,7 +364,7 @@ plot_directed(multiplex_graph$leisure, main = "leisure", col.label = node.cols,
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plot_directed(multiplex_graph$coauthor, main = "coauthor", col.label = node.cols, col.arrow = brewer.pal(5, "Pastel1")[5], layout = layout.kamada.kawai)
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```
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### Fine-tuning with maxiumum community size
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### Fine-tuning with maximum community size
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The `resolution`max_comm_size` parameter applies on multiplex graphs to fine-tuning the size of clusters detected.
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