Merge branch 'master' into torfjelde/step-warmup

Author: torfjelde

.github/workflows/DocsNav.yml

@@ -0,0 +1,49 @@
+name: Add Navbar
+
+on:
+  page_build:  # Triggers the workflow on push events to gh-pages branch
+  workflow_dispatch:  # Allows manual triggering
+  schedule:
+    - cron: '0 0 * * 0'  # Runs every week on Sunday at midnight (UTC)
+
+jobs:
+  add-navbar:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+    steps:
+      - name: Checkout gh-pages
+        uses: actions/checkout@v4
+        with:
+          ref: gh-pages
+          fetch-depth: 0
+
+      - name: Download insert_navbar.sh
+        run: |
+          curl -O https://raw.githubusercontent.com/TuringLang/turinglang.github.io/main/assets/scripts/insert_navbar.sh
+          chmod +x insert_navbar.sh
+
+      - name: Update Navbar
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          git config user.name github-actions[bot]
+          git config user.email github-actions[bot]@users.noreply.github.com
+
+          # Define the URL of the navbar to be used
+          NAVBAR_URL="https://raw.githubusercontent.com/TuringLang/turinglang.github.io/main/assets/scripts/TuringNavbar.html"
+         
+          # Update all HTML files in the current directory (gh-pages root)
+          ./insert_navbar.sh . $NAVBAR_URL
+         
+          # Remove the insert_navbar.sh file
+          rm insert_navbar.sh
+         
+          # Check if there are any changes
+          if [[ -n $(git status -s) ]]; then
+            git add .
+            git commit -m "Added navbar and removed insert_navbar.sh"
+            git push "https://${GITHUB_ACTOR}:${GITHUB_TOKEN}@github.com/${GITHUB_REPOSITORY}.git" gh-pages
+          else
+            echo "No changes to commit"
+          fi

Project.toml

@@ -1,9 +1,9 @@
 name = "AbstractMCMC"
 uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
-keywords = ["markov chain monte carlo", "probablistic programming"]
+keywords = ["markov chain monte carlo", "probabilistic programming"]
 license = "MIT"
 desc = "A lightweight interface for common MCMC methods."
-version = "5.0.0"
+version = "5.3.0"
 
 [deps]
 BangBang = "198e06fe-97b7-11e9-32a5-e1d131e6ad66"
@@ -20,7 +20,7 @@ TerminalLoggers = "5d786b92-1e48-4d6f-9151-6b4477ca9bed"
 Transducers = "28d57a85-8fef-5791-bfe6-a80928e7c999"
 
 [compat]
-BangBang = "0.3.19"
+BangBang = "0.3.19, 0.4"
 ConsoleProgressMonitor = "0.1"
 FillArrays = "1"
 LogDensityProblems = "2"

src/AbstractMCMC.jl

@@ -88,4 +88,18 @@ include("stepper.jl")
 include("transducer.jl")
 include("logdensityproblems.jl")
 
+if isdefined(Base.Experimental, :register_error_hint)
+    function __init__()
+        Base.Experimental.register_error_hint(MethodError) do io, exc, argtypes, _
+            if Base.parentmodule(exc.f) == LogDensityProblems &&
+                any(a -> a <: LogDensityModel, argtypes)
+                print(
+                    io,
+                    "\n`AbstractMCMC.LogDensityModel` is a wrapper and does not itself implement the LogDensityProblems.jl interface. To use LogDensityProblems.jl methods, access the inner type with (e.g.) `logdensity(model.logdensity, params)` instead of `logdensity(model, params)`.",
+                )
+            end
+        end
+    end
+end
+
 end # module AbstractMCMC

src/sample.jl

@@ -2,12 +2,15 @@
 const PROGRESS = Ref(true)
 
 """
-    setprogress!(progress::Bool)
+    setprogress!(progress::Bool; silent::Bool=false)
 
-Enable progress logging globally if `progress` is `true`, and disable it otherwise.
+Enable progress logging globally if `progress` is `true`, and disable it otherwise. 
+Optionally disable informational message if `silent` is `true`.
 """
-function setprogress!(progress::Bool)
-    @info "progress logging is $(progress ? "enabled" : "disabled") globally"
+function setprogress!(progress::Bool; silent::Bool=false)
+    if !silent
+        @info "progress logging is $(progress ? "enabled" : "disabled") globally"
+    end
     PROGRESS[] = progress
     return progress
 end

test/logdensityproblems.jl

@@ -22,6 +22,15 @@
         @test model.logdensity === ℓ
 
         @test_throws ArgumentError AbstractMCMC.LogDensityModel(mylogdensity)
+
+        try
+            LogDensityProblems.logdensity(model, ones(10))
+        catch exc
+            @test exc isa MethodError
+            if isdefined(Base.Experimental, :register_error_hint)
+                @test occursin("is a wrapper", sprint(showerror, exc))
+            end
+        end
     end
 
     @testset "fallback for log densities" begin