Update dependencies

Author: penelopeysm

Manifest.toml

@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.11.2"
+julia_version = "1.11.3"
 manifest_format = "2.0"
 project_hash = "16b1d007f281b947709b24063dec56b6638fa9b1"
 
@@ -222,18 +222,20 @@ version = "1.11.0"
 
 [[deps.Atomix]]
 deps = ["UnsafeAtomics"]
-git-tree-sha1 = "c3b238aa28c1bebd4b5ea4988bebf27e9a01b72b"
+git-tree-sha1 = "93da6c8228993b0052e358ad592ee7c1eccaa639"
 uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458"
-version = "1.0.1"
+version = "1.1.0"
 
     [deps.Atomix.extensions]
     AtomixCUDAExt = "CUDA"
     AtomixMetalExt = "Metal"
+    AtomixOpenCLExt = "OpenCL"
     AtomixoneAPIExt = "oneAPI"
 
     [deps.Atomix.weakdeps]
     CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
     Metal = "dde4c033-4e86-420c-a63e-0dd931031962"
+    OpenCL = "08131aa3-fb12-5dee-8b74-c09406e224a2"
     oneAPI = "8f75cd03-7ff8-4ecb-9b8f-daf728133b1b"
 
 [[deps.AxisAlgorithms]]
@@ -771,9 +773,9 @@ version = "7.15.0"
 
 [[deps.DifferentiationInterface]]
 deps = ["ADTypes", "LinearAlgebra"]
-git-tree-sha1 = "d86f29074367f1bb92957e8d0b77badd187a97bc"
+git-tree-sha1 = "b44d8cedd863c1c7a9f3ec82555539ec9935d07f"
 uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63"
-version = "0.6.32"
+version = "0.6.33"
 
     [deps.DifferentiationInterface.extensions]
     DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore"
@@ -783,6 +785,7 @@ version = "0.6.32"
     DifferentiationInterfaceFiniteDiffExt = "FiniteDiff"
     DifferentiationInterfaceFiniteDifferencesExt = "FiniteDifferences"
     DifferentiationInterfaceForwardDiffExt = ["ForwardDiff", "DiffResults"]
+    DifferentiationInterfaceGTPSAExt = "GTPSA"
     DifferentiationInterfaceMooncakeExt = "Mooncake"
     DifferentiationInterfacePolyesterForwardDiffExt = "PolyesterForwardDiff"
     DifferentiationInterfaceReverseDiffExt = ["ReverseDiff", "DiffResults"]
@@ -803,6 +806,7 @@ version = "0.6.32"
     FiniteDiff = "6a86dc24-6348-571c-b903-95158fe2bd41"
     FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000"
     ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
+    GTPSA = "b27dd330-f138-47c5-815b-40db9dd9b6e8"
     Mooncake = "da2b9cff-9c12-43a0-ae48-6db2b0edb7d6"
     PolyesterForwardDiff = "98d1487c-24ca-40b6-b7ab-df2af84e126b"
     ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
@@ -884,9 +888,9 @@ version = "3.5.0"
 
 [[deps.DynamicPPL]]
 deps = ["ADTypes", "AbstractMCMC", "AbstractPPL", "Accessors", "BangBang", "Bijectors", "Compat", "ConstructionBase", "Distributions", "DocStringExtensions", "InteractiveUtils", "KernelAbstractions", "LinearAlgebra", "LogDensityProblems", "LogDensityProblemsAD", "MacroTools", "OrderedCollections", "Random", "Requires", "Test"]
-git-tree-sha1 = "1e033aa6126051f5fed765c22671561a2808be91"
+git-tree-sha1 = "18fcc77ba683967339473b731143fa269ea671f5"
 uuid = "366bfd00-2699-11ea-058f-f148b4cae6d8"
-version = "0.34.1"
+version = "0.34.2"
 
     [deps.DynamicPPL.extensions]
     DynamicPPLChainRulesCoreExt = ["ChainRulesCore"]
@@ -1625,9 +1629,9 @@ version = "0.1.17"
 
 [[deps.LazyArrays]]
 deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "SparseArrays"]
-git-tree-sha1 = "bf3957638b78521f286f3b2ebaa46a475dc74817"
+git-tree-sha1 = "795ae125c98c58ceb1de562633703e0b120a1b17"
 uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02"
-version = "2.3.2"
+version = "2.4.0"
 
     [deps.LazyArrays.extensions]
     LazyArraysBandedMatricesExt = "BandedMatrices"
@@ -2549,9 +2553,9 @@ version = "1.2.0"
 
 [[deps.OrdinaryDiffEqCore]]
 deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FastPower", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "SymbolicIndexingInterface", "TruncatedStacktraces"]
-git-tree-sha1 = "f5f5af4cd0776eb17bb0a90cf82c6d2be17b59b2"
+git-tree-sha1 = "6a58da59c5f7640fd09636231bd73dfb4744ce53"
 uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
-version = "1.15.0"
+version = "1.15.1"
 weakdeps = ["EnzymeCore"]
 
     [deps.OrdinaryDiffEqCore.extensions]
@@ -2998,9 +3002,9 @@ version = "0.6.12"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "32f824db4e5bab64e25a12b22483a30a6b813d08"
+git-tree-sha1 = "ea6ad53c168c7c1c2e8f870aefda269692a8a91f"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "3.27.4"
+version = "3.28.0"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsFastBroadcastExt = "FastBroadcast"
@@ -3120,9 +3124,9 @@ version = "0.1.1"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
-git-tree-sha1 = "80396dc3496a1718fc356797fa54034b6c533a18"
+git-tree-sha1 = "fcb73c66a5071d4d026aa84f9950a4d1f0dadf33"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.72.0"
+version = "2.72.1"
 
     [deps.SciMLBase.extensions]
     SciMLBaseChainRulesCoreExt = "ChainRulesCore"
@@ -3270,9 +3274,9 @@ version = "1.11.0"
 
 [[deps.SparseConnectivityTracer]]
 deps = ["ADTypes", "DocStringExtensions", "FillArrays", "LinearAlgebra", "Random", "SparseArrays"]
-git-tree-sha1 = "010b3c44301805d1ede9159f449a351d61172aa6"
+git-tree-sha1 = "f6d636dcf886cf498b3bc484f48c37741d8aac6e"
 uuid = "9f842d2f-2579-4b1d-911e-f412cf18a3f5"
-version = "0.6.9"
+version = "0.6.10"
 
     [deps.SparseConnectivityTracer.extensions]
     SparseConnectivityTracerDataInterpolationsExt = "DataInterpolations"
@@ -3371,9 +3375,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"]
 
 [[deps.StaticArrays]]
 deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"]
-git-tree-sha1 = "47091a0340a675c738b1304b58161f3b0839d454"
+git-tree-sha1 = "02c8bd479d26dbeff8a7eb1d77edfc10dacabc01"
 uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "1.9.10"
+version = "1.9.11"
 weakdeps = ["ChainRulesCore", "Statistics"]
 
     [deps.StaticArrays.extensions]
@@ -3443,10 +3447,10 @@ uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f"
 version = "2.4.1"
 
 [[deps.StochasticDiffEq]]
-deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FastPower", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "OrdinaryDiffEqCore", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
-git-tree-sha1 = "b0a5dce397b3bc5478ee1de3127878daa061db28"
+deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FastPower", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
+git-tree-sha1 = "1f1161aca132f7f776acfb3785abf449aa99a1e9"
 uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
-version = "6.72.1"
+version = "6.73.0"
 
 [[deps.StrideArraysCore]]
 deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
@@ -3836,9 +3840,9 @@ version = "1.1.42+0"
 
 [[deps.XZ_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "beef98d5aad604d9e7d60b2ece5181f7888e2fd6"
+git-tree-sha1 = "56c6604ec8b2d82cc4cfe01aa03b00426aac7e1f"
 uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800"
-version = "5.6.4+0"
+version = "5.6.4+1"
 
 [[deps.Xorg_libICE_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]