diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION new file mode 100644 index 000000000..08b82dda3 --- /dev/null +++ b/CRAN-SUBMISSION @@ -0,0 +1,3 @@ +Version: 1.4.0 +Date: 2025-12-11 22:31:58 UTC +SHA: 02208869b47b790564258688d5861d429bccc61e diff --git a/DESCRIPTION b/DESCRIPTION index c059a50fd..e01a5d650 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,13 +1,13 @@ Type: Package Package: serocalculator Title: Estimating Infection Rates from Serological Data -Version: 1.3.0.9061 +Version: 1.4.0 Authors@R: c( - person("Peter", "Teunis", , "p.teunis@emory.edu", role = c("aut", "cph"), - comment = "Author of the method and original code."), person("Kristina", "Lai", , "kwlai@ucdavis.edu", role = c("aut", "cre")), person("Chris", "Orwa", role = "aut"), person("Kwan Ho", "Lee", , "ksjlee@ucdavis.edu", role = "ctb"), + person("Peter", "Teunis", , "p.teunis@emory.edu", role = c("aut", "cph"), + comment = "Author of the method and original code."), person("Kristen", "Aiemjoy", , "kaiemjoy@ucdavis.edu", role = "aut"), person("Douglas Ezra", "Morrison", , "demorrison@ucdavis.edu", role = "aut") ) diff --git a/NEWS.md b/NEWS.md index e43d7598f..dfd3f8308 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# serocalculator (development version) +# serocalculator 1.4.0 ## New features @@ -54,6 +54,7 @@ ## Bug fixes +* Fixed CRAN errors (#464) * Fixed stratification issue in enteric fever vignette (#418) * Fixed issue in `graph.curve.params()` where MCMC samples with the same iteration number from different MCMC chains diff --git a/cran-comments.md b/cran-comments.md index f4aa9e392..d08b27d7a 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -1,15 +1,13 @@ ## Resubmission -* Package had been archived from CRAN on 26-11-2024 following policy violation (Internet Access) -* In response, we removed urls with unstable servers and added internal datasets for examples and testing +* Package was flagged for errors on 11-14-2025 due to errors in `expect_snapshot_data()` and an out of date URL +* In response, we copied `expect_snapshot_data()` into an internal function (with permission from creators) + and replaced the out of date URL * Includes additional developments consistent with a minor version increase. * Full updates are described in NEWS.md. * There are currently no downstream dependencies for this package ## R CMD check results -0 errors | 0 warnings | 1 note +0 errors | 0 warnings | 0 notes -* There are some words flagged as misspellings in DESCRIPTION, however these are spelled correctly. - -* Package was previously archived on CRAN diff --git a/man/serocalculator-package.Rd b/man/serocalculator-package.Rd index d3b5b59f6..bddb6eeb6 100644 --- a/man/serocalculator-package.Rd +++ b/man/serocalculator-package.Rd @@ -22,8 +22,8 @@ Useful links: Authors: \itemize{ - \item Peter Teunis \email{p.teunis@emory.edu} (Author of the method and original code.) [copyright holder] \item Chris Orwa + \item Peter Teunis \email{p.teunis@emory.edu} (Author of the method and original code.) [copyright holder] \item Kristen Aiemjoy \email{kaiemjoy@ucdavis.edu} \item Douglas Ezra Morrison \email{demorrison@ucdavis.edu} }