feat: remove deprecated functional_ranges_deprecated_json column from ScoreCalibration model

Author: bencap

alembic/versions/c770fa9e6e58_drop_functional_range_jsonb.py

@@ -0,0 +1,38 @@
+"""drop functional range jsonb
+
+Revision ID: c770fa9e6e58
+Revises: 16beeb593513
+Create Date: 2025-11-17 22:19:22.440742
+
+"""
+
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+from alembic import op
+
+# revision identifiers, used by Alembic.
+revision = "c770fa9e6e58"
+down_revision = "16beeb593513"
+branch_labels = None
+depends_on = None
+
+
+def upgrade():
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_column("score_calibrations", "functional_ranges_deprecated_json")
+    # ### end Alembic commands ###
+
+
+def downgrade():
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.add_column(
+        "score_calibrations",
+        sa.Column(
+            "functional_ranges_deprecated_json",
+            postgresql.JSONB(astext_type=sa.Text()),
+            autoincrement=False,
+            nullable=True,
+        ),
+    )
+    # ### end Alembic commands ###

src/mavedb/models/score_calibration.py

@@ -41,9 +41,6 @@ class ScoreCalibration(Base):
     baseline_score = Column(Float, nullable=True)
     baseline_score_description = Column(String, nullable=True)
 
-    # Ranges and sources are stored as JSONB (intersection structure) to avoid complex joins for now.
-    # ranges: list[ { label, description?, classification, range:[lower,upper], inclusive_lower_bound, inclusive_upper_bound } ]
-    functional_ranges_deprecated_json = Column(JSONB(none_as_null=True), nullable=True)
     functional_ranges: Mapped[list["ScoreCalibrationFunctionalClassification"]] = relationship(
         "ScoreCalibrationFunctionalClassification",
         back_populates="calibration",