Temporarily disable the requirement that phenotypic assay mechanism keywords have a Gene Ontology code.

We are populating curated pillar project metadata, and the curated data set uses other codes. Initially, terms in this vocabulary will not have codes, but we will soon revise the vocabulary items to add GO codes or others as appropriate.

Author: jstone-dev

src/mavedb/lib/validation/keywords.py

@@ -6,11 +6,13 @@
 
 
 def validate_code(key: str, label: str, code: Optional[str]):
-    if key.lower() == "phenotypic assay mechanism" and label.lower() != "other":
-        # The Gene Ontology accession is a unique seven digit identifier prefixed by GO:.
-        # e.g. GO:0005739, GO:1904659, or GO:0016597.
-        if code is None or not re.match(r"^GO:\d{7}$", code):
-            raise ValidationError("Invalid Gene Ontology accession.")
+    # TODO Re-enable this when we have GO codes for all phenotypic assay mechanisms.
+    pass
+    # if key.lower() == "phenotypic assay mechanism" and label.lower() != "other":
+    #     # The Gene Ontology accession is a unique seven digit identifier prefixed by GO:.
+    #     # e.g. GO:0005739, GO:1904659, or GO:0016597.
+    #     if code is None or not re.match(r"^GO:\d{7}$", code):
+    #         raise ValidationError("Invalid Gene Ontology accession.")
 
 
 # TODO: label will not be Optional when we confirm the final controlled keyword list.