Why Are BAFs Recalculated in Battenberg Instead of Using _Tumour_mutantBAF.tab #158
Description
What surprised me about Battenberg is that it calculates the BAF values twice, rather than using the precomputed BAFs from the earlier step (e.g., *_Tumour_mutantBAF.tab). Is there a specific reason for this approach?
all the best,
Marian