Updated dependencies and tests

Author: vedran-kasalica

pom.xml

@@ -146,7 +146,7 @@
 		<dependency>
 			<groupId>org.apache.commons</groupId>
 			<artifactId>commons-lang3</artifactId>
-			<version>3.12.0</version>
+			<version>3.13.0</version>
 		</dependency>
 		<dependency>
 			<groupId>org.apache.logging.log4j</groupId>
@@ -162,13 +162,13 @@
 		<dependency>
 			<groupId>org.json</groupId>
 			<artifactId>json</artifactId>
-			<version>20230227</version>
+			<version>20230618</version>
 		</dependency>
 		<!-- https://mvnrepository.com/artifact/org.junit.jupiter/junit-jupiter-api -->
 		<dependency>
 			<groupId>org.junit.jupiter</groupId>
 			<artifactId>junit-jupiter-api</artifactId>
-			<version>5.8.2</version>
+			<version>5.10.0</version>
 			<scope>test</scope>
 		</dependency>
 		<dependency>
@@ -185,7 +185,7 @@
 		<dependency>
 		    <groupId>org.antlr</groupId>
 		    <artifactId>antlr4-runtime</artifactId>
-		    <version>4.12.0</version>
+		    <version>4.13.0</version>
 		</dependency>
 		<dependency>
 			<groupId>org.yaml</groupId>

src/test/java/nl/uu/cs/ape/test/sat/ape/UseCaseTest.java

@@ -152,10 +152,10 @@ void testUseCase(String name, String evaluationPath)
                 assertNotNull(files);
                 assertEquals(mutation.number_of_cwl_files,
                         Stream.of(files).filter(file -> file.getName().endsWith(".cwl")).count());
-                assertEquals(mutation.number_of_cwl_files,
-                        Stream.of(files).filter(file -> file.getName().endsWith("inp.yml")).count());
+                assertEquals(1,
+                        Stream.of(files).filter(file -> file.getName().startsWith("input.yml")).count());
                 for (File f : files) {
-                    assertTrue(f.getName().startsWith("workflowSolution_"));
+                    assertTrue(f.getName().startsWith("workflowSolution_") || f.getName().startsWith("input.yml"));
                 }
                 success("All %s expected CWL files were generated", mutation.number_of_cwl_files);
             }