-
Notifications
You must be signed in to change notification settings - Fork 1
Tutorial 4_ces_inference.ipynb with bias doesn't quite work yet #245
Copy link
Copy link
Open
Labels
bugSomething isn't workingSomething isn't working
Description
Describe the bug
With the bias enabled as a fit parameter for ces inference, the likelihood gives nan.
To Reproduce
Load the following configuration file with:
parameter_definition:
livetime:
nominal_value: 5000
ptype: livetime
fittable: false
description: Livetime in day
fiducial_mass:
nominal_value: 4
ptype: needs_reinit
fittable: false
description: Fiducial mass in ton
test_flat_rate_multiplier:
nominal_value: 300
ptype: rate
fittable: true
fit_limits:
- 0
- null
parameter_interval_bounds:
- 0
- 50
fit_guess: 300
test_gaussian_rate_multiplier:
nominal_value: 100
ptype: rate
fittable: true
fit_limits:
- 0
- null
parameter_interval_bounds:
- 0
- 50
fit_guess: 100
smearing_a:
nominal_value: 50
ptype: shape
uncertainty: 0.05
relative_uncertainty: true
fittable: false
blueice_anchors:
- 50
fit_limits:
- 20
- 80
description: smearing shaping parameter
smearing_b:
nominal_value: 18
ptype: shape
uncertainty: 0.05
relative_uncertainty: true
fittable: false
blueice_anchors:
- 18
fit_limits:
- 6
- 30
description: smearing shaping parameter
A:
nominal_value: 0.18
ptype: shape
uncertainty: 0.05
relative_uncertainty: true
fittable: true
blueice_anchors:
- 0.06
- 0.12
- 0.18
- 0.24
- 0.30
fit_limits:
- 0.06
- 0.30
description: bais shaping parameter
k:
nominal_value: 0.01707
ptype: shape
uncertainty: 0.05
relative_uncertainty: true
fittable: false
blueice_anchors:
- 0.01707
fit_limits:
- 0.01
- 0.03
description: bias shaping parameter
B:
nominal_value: 0.0
ptype: shape
uncertainty: 0.01
relative_uncertainty: true
fittable: false
blueice_anchors:
- 0.0
fit_limits:
- -0.01
- 0.01
description: bias shaping parameter
efficiency_constant:
nominal_value: 1.0
ptype: shape
uncertainty: 0.01
relative_uncertainty: false
fittable: false
blueice_anchors:
- 1.0
likelihood_config:
template_folder: null
likelihood_terms:
- name: science_run_0
default_source_class: alea.ces_source.CESTemplateSource
likelihood_type: blueice.likelihood.UnbinnedLogLikelihood
analysis_space:
- ces: np.arange(0, 500, 1)
minimal_energy_resolution: 0.1
apply_efficiency: true
efficiency_model: constant
efficiency_parameters:
- efficiency_constant
apply_smearing: true
smearing_model: gaussian
smearing_parameters:
- smearing_a
- smearing_b
apply_bias: true
bias_model: arctan
bias_parameters:
- A
- k
- B
livetime_parameter: livetime
fiducial_mass_parameter: fiducial_mass
slice_args: {}
sources:
- name: test_gaussian
class: alea.ces_source.CESMonoenergySource
peak_energy: 120
parameters:
- test_gaussian_rate_multiplier
- smearing_a
- smearing_b
- A
- k
- B
- efficiency_constant
- name: test_flat
class: alea.ces_source.CESFlatSource
parameters:
- test_flat_rate_multiplier
- efficiency_constant
Then at the block, the ll_vals_c will give none:
confidence_level = 0.9
funcGrainSize = 10
xRange = [95, 120]
gs_rates = np.linspace(*xRange, funcGrainSize)
ll_vals_c = []
for gs_iter, gs_rate in tqdm(enumerate(gs_rates)):
_, ll_val_c = dataFit_models.fit(test_gaussian_rate_multiplier=gs_rate)
ll_vals_c.append(ll_val_c)
print(key, ll_vals_c)
Expected behavior
The fit of bias parameters should be similar to that to the fit of the smearing parameters.
Screenshots
If applicable, add screenshots to help explain your problem.
Additional context
The code is not exactly 4_ces_inference.ipynb, and didn't produce a minimal code yet. However, hopefully, with the information above, it's enough to reproduce the bug.
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
bugSomething isn't workingSomething isn't working