Remove '#' from feature_id in output headers #112
Workflow file for this run
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| name: Short runs | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ "master", "sc_*" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| env: | |
| RUN_NAME: Human.ONT_simulated.R9.uniform_cov | |
| LAUNCHER: ${{github.workspace}}/tests/github/run_pipeline.py | |
| CFG_DIR: /abga/work/andreyp/ci_isoquant/data | |
| BIN_PATH: /abga/work/andreyp/ci_isoquant/bin/ | |
| OUTPUT_BASE: /abga/work/andreyp/ci_isoquant/output/${{github.ref_name}}/ | |
| concurrency: | |
| group: ${{github.workflow}} | |
| cancel-in-progress: false | |
| jobs: | |
| integration-tests: | |
| runs-on: | |
| labels: [isoquant] | |
| name: 'IsoQuant toy dataset runs' | |
| steps: | |
| - name: 'Cleanup' | |
| run: > | |
| set -e && | |
| shopt -s dotglob && | |
| rm -rf * | |
| - name: 'Checkout' | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| - name: Run integration tests | |
| run: | | |
| export PATH=$PATH:${{env.BIN_PATH}} | |
| pytest-3 tests/console_test.py -v |