== Error == file not found: ../reference/GCF_000005845.2_ASM584v2_genomic.fna$ (single reads, library number: 1, library type: trusted-contigs)

[wagaw12]

I was doing the assembly using -- isolate and -- trusted contings options and I have the problem of running it successfully, as the log file shows the above problem. Any help?

[asl]

Per error message – file was not found. Are you sure its filename contains an $ sign?

[wagaw12]

Thanks; it has no $ sign, and it works as it should.