Update docs

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docs/contents.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="#adapt-metrics">Metrics</a><ul>
@@ -447,15 +450,24 @@ <h1>ADAPT<a class="headerlink" href="#adapt" title="Permalink to this headline">
 <tr class="row-even"><td><p><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferNN.html#adapt.parameter_based.RegularTransferNN" title="adapt.parameter_based.RegularTransferNN"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.RegularTransferNN</span></code></a>([task, ...])</p></td>
 <td><p>Regular Transfer with Neural Network</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="generated/adapt.parameter_based.FineTuning.html#adapt.parameter_based.FineTuning" title="adapt.parameter_based.FineTuning"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.FineTuning</span></code></a>([encoder, task, ...])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="generated/adapt.parameter_based.RegularTransferGP.html#adapt.parameter_based.RegularTransferGP" title="adapt.parameter_based.RegularTransferGP"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.RegularTransferGP</span></code></a>([...])</p></td>
+<td><p>Regular Transfer with Gaussian Process</p></td>
+</tr>
+<tr class="row-even"><td><p><a class="reference internal" href="generated/adapt.parameter_based.FineTuning.html#adapt.parameter_based.FineTuning" title="adapt.parameter_based.FineTuning"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.FineTuning</span></code></a>([encoder, task, ...])</p></td>
 <td><p>FineTuning : finetunes pretrained networks on target data.</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferTreeClassifier.html#adapt.parameter_based.TransferTreeClassifier" title="adapt.parameter_based.TransferTreeClassifier"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferTreeClassifier</span></code></a>([...])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferTreeClassifier.html#adapt.parameter_based.TransferTreeClassifier" title="adapt.parameter_based.TransferTreeClassifier"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferTreeClassifier</span></code></a>([...])</p></td>
 <td><p>TransferTreeClassifier: Modify a source Decision tree on a target dataset.</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferForestClassifier.html#adapt.parameter_based.TransferForestClassifier" title="adapt.parameter_based.TransferForestClassifier"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferForestClassifier</span></code></a>([...])</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferForestClassifier.html#adapt.parameter_based.TransferForestClassifier" title="adapt.parameter_based.TransferForestClassifier"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferForestClassifier</span></code></a>([...])</p></td>
 <td><p>TransferForestClassifier: Modify a source Random Forest on a target dataset.</p></td>
 </tr>
+<tr class="row-odd"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferTreeSelector.html#adapt.parameter_based.TransferTreeSelector" title="adapt.parameter_based.TransferTreeSelector"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferTreeSelector</span></code></a>([...])</p></td>
+<td><p>TransferTreeSelector : Run several decision tree transfer algorithms on a target dataset and select the best one.</p></td>
+</tr>
+<tr class="row-even"><td><p><a class="reference internal" href="generated/adapt.parameter_based.TransferForestSelector.html#adapt.parameter_based.TransferForestSelector" title="adapt.parameter_based.TransferForestSelector"><code class="xref py py-obj docutils literal notranslate"><span class="pre">parameter_based.TransferForestSelector</span></code></a>([...])</p></td>
+<td><p>TransferForestSelector : Run several decision tree transfer algorithms on a target dataset and select the best one for each tree of the random forest.</p></td>
+</tr>
 </tbody>
 </table>
 </section>

docs/examples/Classification.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>
@@ -527,8 +530,8 @@
 </style>
 <section id="Classification">
 <h1>Classification<a class="headerlink" href="#Classification" title="Permalink to this headline"></a></h1>
-<div class="btn btn-notebook" role="button"><p><img alt="1c1527ebd2d8455f981eac128806a646" src="../_images/colab_logo_32px.png" /> <a class="reference external" href="https://colab.research.google.com/drive/1ANQUix9Y6V4RXu-vAaCFGmU979d5m4bO?usp=sharing">Run in Google Colab</a></p>
-</div><div class="btn btn-notebook" role="button"><p><img alt="6bd6895ad3024031bf63c3e2f1c4207a" src="../_images/github_logo_32px.png" /> <a class="reference external" href="https://github.com/adapt-python/notebooks/blob/d0364973c642ea4880756cef4e9f2ee8bb5e8495/Classification.ipynb">View on GitHub</a></p>
+<div class="btn btn-notebook" role="button"><p><img alt="7e3bb452f80347b487182be357720633" src="../_images/colab_logo_32px.png" /> <a class="reference external" href="https://colab.research.google.com/drive/1ANQUix9Y6V4RXu-vAaCFGmU979d5m4bO?usp=sharing">Run in Google Colab</a></p>
+</div><div class="btn btn-notebook" role="button"><p><img alt="6a4ad1d956994777a65593e9754f1901" src="../_images/github_logo_32px.png" /> <a class="reference external" href="https://github.com/adapt-python/notebooks/blob/d0364973c642ea4880756cef4e9f2ee8bb5e8495/Classification.ipynb">View on GitHub</a></p>
 </div><p>You will find here the application of DA methods from the ADAPT package on a simple two dimensional DA classification problem.</p>
 <p>First we import packages needed in the following. We will use <code class="docutils literal notranslate"><span class="pre">matplotlib</span> <span class="pre">Animation</span></code> tools in order to get a visual understanding of the mselected methods:</p>
 <div class="nbinput nblast docutils container">

docs/examples/Developer_Guide.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>

docs/examples/Flowers_example.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>

docs/examples/Heart_Failure.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>

docs/examples/Multi_fidelity.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>
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 </style>
 <section id="Multi-Fidelity">
 <h1>Multi-Fidelity<a class="headerlink" href="#Multi-Fidelity" title="Permalink to this headline"></a></h1>
-<div class="btn btn-notebook" role="button"><p><img alt="fe758e855f4c4b1dbec0d2a24bfbd1d8" src="../_images/colab_logo_32px.png" /> <a class="reference external" href="https://colab.research.google.com/drive/1Cc9TVY_Tl_boVzZDNisQnqe6Qx78svqe?usp=sharing">Run in Google Colab</a></p>
-</div><div class="btn btn-notebook" role="button"><p><img alt="fa66fbcf91614ae1a57ca11f12d0b398" src="../_images/github_logo_32px.png" /> <a class="reference external" href="https://github.com/adapt-python/notebooks/blob/d0364973c642ea4880756cef4e9f2ee8bb5e8495/Multi_fidelity.ipynb">View on GitHub</a></p>
+<div class="btn btn-notebook" role="button"><p><img alt="e9948ad0381144438747a97902f2e299" src="../_images/colab_logo_32px.png" /> <a class="reference external" href="https://colab.research.google.com/drive/1Cc9TVY_Tl_boVzZDNisQnqe6Qx78svqe?usp=sharing">Run in Google Colab</a></p>
+</div><div class="btn btn-notebook" role="button"><p><img alt="9593f1d04e8d487fae6614d483a068c2" src="../_images/github_logo_32px.png" /> <a class="reference external" href="https://github.com/adapt-python/notebooks/blob/d0364973c642ea4880756cef4e9f2ee8bb5e8495/Multi_fidelity.ipynb">View on GitHub</a></p>
 </div><p>The following example is a 1D regression multi-fidelity issue. Blue points are low fidelity observations and orange points are high fidelity observations. The goal is to use both datasets to learn the task on the [0, 1] interval.</p>
 <p>To tackle this challenge, we use here the parameter-based method: <a class="reference external" href="#RegularTransferNN">RegularTransferNN</a></p>
 <div class="nbinput nblast docutils container">

docs/examples/Office_example.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>

docs/examples/Quick_start.html

@@ -92,9 +92,12 @@
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLR.html">RegularTransferLR</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferLC.html">RegularTransferLC</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferNN.html">RegularTransferNN</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.RegularTransferGP.html">RegularTransferGP</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.FineTuning.html">FineTuning</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeClassifier.html">TransferTreeClassifier</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestClassifier.html">TransferForestClassifier</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferTreeSelector.html">TransferTreeSelector</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../generated/adapt.parameter_based.TransferForestSelector.html">TransferForestSelector</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../contents.html#adapt-metrics">Metrics</a><ul>