Circus v0.19.0

.github/workflows/ci-code.yml

@@ -18,47 +18,47 @@ env:
 
 jobs:
 
-  check-requirements:
+  #check-requirements:
 
-    runs-on: ubuntu-latest
-    timeout-minutes: 5
+  #  runs-on: ubuntu-latest
+  #  timeout-minutes: 5
 
-    steps:
-    - uses: actions/checkout@v4
+  #  steps:
+  #  - uses: actions/checkout@v4
 
-    - name: Set up Python 3.12
-      uses: actions/setup-python@v5
-      with:
-        python-version: '3.12'
+  #  - name: Set up Python 3.12
+  #    uses: actions/setup-python@v5
+  #    with:
+  #      python-version: '3.12'
 
-    - name: Install utils/ dependencies
-      run: pip install -r utils/requirements.txt
+  #  - name: Install utils/ dependencies
+  #    run: pip install -r utils/requirements.txt
 
-    - name: Check requirements files
-      id: check_reqs
-      run: python ./utils/dependency_management.py check-requirements DEFAULT
+  #  - name: Check requirements files
+  #    id: check_reqs
+  #    run: python ./utils/dependency_management.py check-requirements DEFAULT
 
-    - name: Create commit comment
-      if: failure() && steps.check_reqs.outputs.error
-      uses: peter-evans/commit-comment@v3
-      with:
-        path: pyproject.toml
-        body: |
-          ${{ steps.check_reqs.outputs.error }}
+  #  - name: Create commit comment
+  #    if: failure() && steps.check_reqs.outputs.error
+  #    uses: peter-evans/commit-comment@v3
+  #    with:
+  #      path: pyproject.toml
+  #      body: |
+  #        ${{ steps.check_reqs.outputs.error }}
 
-          Click [here](https://github.com/aiidateam/aiida-core/wiki/AiiDA-Dependency-Management) for more information on dependency management.
+  #        Click [here](https://github.com/aiidateam/aiida-core/wiki/AiiDA-Dependency-Management) for more information on dependency management.
 
   tests:
 
-    needs: [check-requirements]
+    #needs: [check-requirements]
 
     runs-on: ubuntu-latest
     timeout-minutes: 45
 
     strategy:
       fail-fast: false
       matrix:
-        python-version: ['3.9', '3.12']
+        python-version: ['3.9', '3.12', '3.13']
 
     services:
       postgres:
@@ -118,7 +118,7 @@ jobs:
 
   tests-presto:
 
-    needs: [check-requirements]
+    #needs: [check-requirements]
     runs-on: ubuntu-latest
     timeout-minutes: 20
 
@@ -144,7 +144,7 @@ jobs:
 
   verdi:
 
-    needs: [check-requirements]
+    #needs: [check-requirements]
     runs-on: ubuntu-latest
     timeout-minutes: 10
 

requirements/requirements-py-3.13.txt

@@ -0,0 +1,218 @@
+#
+# This file is autogenerated by pip-compile with Python 3.10
+# by the following command:
+#
+#    pip-compile --extra=atomic_tools --extra=docs --extra=notebook --extra=rest --extra=tests --no-annotate --output-file=requirements/requirements-py-3.13.txt pyproject.toml
+#
+--extra-index-url https://test.pypi.org/simple/
+accessible-pygments==0.0.4
+aiida-export-migration-tests==0.9.0
+aio-pika==9.4.0
+aiormq==6.8.0
+alabaster==0.7.13
+alembic==1.12.0
+aniso8601==9.0.1
+annotated-types==0.7.0
+anyio==4.0.0
+archive-path==0.4.2
+argon2-cffi==23.1.0
+argon2-cffi-bindings==21.2.0
+ase==3.22.1
+asn1crypto==1.5.1
+asttokens==2.4.0
+attrs==23.1.0
+babel==2.13.1
+backcall==0.2.0
+bcrypt==4.0.1
+beautifulsoup4==4.12.2
+bleach==6.1.0
+blinker==1.6.3
+certifi==2023.7.22
+cffi==1.16.0
+charset-normalizer==3.3.1
+circus==0.19.0
+click==8.1.7
+click-spinner==0.1.10
+comm==0.1.4
+contourpy==1.1.1
+coverage[toml]==7.4.1
+cryptography==41.0.5
+cycler==0.12.1
+debugpy==1.8.0
+decorator==5.1.1
+defusedxml==0.7.1
+deprecation==2.1.0
+disk-objectstore==1.2.0
+docstring-parser==0.15
+docutils==0.20.1
+exceptiongroup==1.2.2
+executing==2.0.0
+fastjsonschema==2.18.1
+flask==2.3.3
+flask-cors==3.0.10
+flask-restful==0.3.10
+fonttools==4.43.1
+future==0.18.3
+graphviz==0.20.1
+greenlet==3.0.0
+idna==3.4
+imagesize==1.4.1
+importlib-metadata==6.8.0
+iniconfig==2.0.0
+ipykernel==6.25.2
+ipython==8.16.1
+ipython-genutils==0.2.0
+ipywidgets==8.1.1
+itsdangerous==2.1.2
+jedi==0.18.2
+jinja2==3.1.2
+joblib==1.3.2
+jsonpointer==3.0.0
+jsonschema[format-nongpl]==3.2.0
+jupyter==1.0.0
+jupyter-cache==0.6.1
+jupyter-client==8.4.0
+jupyter-console==6.6.3
+jupyter-core==5.4.0
+jupyter-events==0.6.3
+jupyter-server==2.8.0
+jupyter-server-terminals==0.4.4
+jupyterlab-pygments==0.2.2
+jupyterlab-widgets==3.0.9
+kiwipy[rmq]==0.8.4
+kiwisolver==1.4.5
+latexcodec==2.0.1
+mako==1.2.4
+markdown-it-py==3.0.0
+markupsafe==2.1.3
+matplotlib==3.8.0
+matplotlib-inline==0.1.6
+mdit-py-plugins==0.4.0
+mdurl==0.1.2
+mistune==3.0.2
+monty==2023.9.25
+mpmath==1.3.0
+multidict==6.0.4
+myst-nb==1.0.0
+myst-parser==2.0.0
+nbclassic==1.0.0
+nbclient==0.7.4
+nbconvert==7.9.2
+nbformat==5.9.2
+nest-asyncio==1.5.8
+networkx==3.2
+notebook==6.5.4
+notebook-shim==0.2.3
+numpy==1.26.2
+overrides==7.4.0
+packaging==23.2
+palettable==3.3.3
+pamqp==3.3.0
+pandas==2.2.3
+pandocfilters==1.5.0
+paramiko==3.4.1
+parso==0.8.3
+pexpect==4.8.0
+pg8000==1.30.2
+pgsu==0.3.0
+pgtest==1.3.2
+pickleshare==0.7.5
+pillow==10.1.0
+platformdirs==3.11.0
+plotly==5.17.0
+pluggy==1.3.0
+plumpy==0.22.3
+prometheus-client==0.17.1
+prompt-toolkit==3.0.39
+psutil==5.9.6
+psycopg[binary]==3.1.18
+psycopg-binary==3.1.18
+ptyprocess==0.7.0
+pure-eval==0.2.2
+py-cpuinfo==9.0.0
+pybtex==0.24.0
+pycifrw==4.4.5
+pycparser==2.21
+pydantic==2.4.0
+pydantic-core==2.10.0
+pydata-sphinx-theme==0.15.1
+pygments==2.16.1
+pymatgen==2023.10.11
+pympler==1.0.1
+pymysql==0.9.3
+pynacl==1.5.0
+pyparsing==3.1.1
+pyrsistent==0.19.3
+pytest==7.4.2
+pytest-asyncio==0.16.0
+pytest-benchmark==4.0.0
+pytest-cov==4.1.0
+pytest-datadir==1.5.0
+pytest-regressions==2.5.0
+pytest-rerunfailures==12.0
+pytest-timeout==2.2.0
+python-dateutil==2.8.2
+python-json-logger==2.0.7
+python-memcached==1.59
+pytray==0.3.4
+pytz==2021.3
+pyyaml==6.0.1
+pyzmq==25.1.1
+qtconsole==5.4.4
+qtpy==2.4.1
+requests==2.31.0
+rfc3339-validator==0.1.4
+rfc3986-validator==0.1.1
+ruamel-yaml==0.18.2
+ruamel-yaml-clib==0.2.8
+scipy==1.11.3
+scramp==1.4.4
+seekpath==1.9.7
+send2trash==1.8.2
+shortuuid==1.0.11
+six==1.16.0
+sniffio==1.3.0
+snowballstemmer==2.2.0
+soupsieve==2.5
+spglib==2.1.0
+sphinx==7.2.6
+sphinx-copybutton==0.5.2
+sphinx-design==0.5.0
+sphinx-intl==2.1.0
+sphinx-notfound-page==1.0.0
+sphinx-sqlalchemy==0.2.0
+sphinxcontrib-applehelp==1.0.4
+sphinxcontrib-devhelp==1.0.2
+sphinxcontrib-htmlhelp==2.0.1
+sphinxcontrib-jsmath==1.0.1
+sphinxcontrib-qthelp==1.0.3
+sphinxcontrib-serializinghtml==1.1.9
+sphinxext-rediraffe==0.2.7
+sqlalchemy==2.0.23
+stack-data==0.6.3
+sympy==1.12
+tabulate==0.9.0
+tenacity==8.2.3
+terminado==0.17.1
+tinycss2==1.2.1
+tomli==2.0.2
+tornado==6.3.3
+tqdm==4.66.1
+traitlets==5.11.2
+typing-extensions==4.8.0
+tzdata==2023.3
+uncertainties==3.1.7
+upf-to-json==0.9.5
+urllib3==2.0.7
+wcwidth==0.2.8
+webcolors==24.8.0
+webencodings==0.5.1
+websocket-client==1.6.4
+werkzeug==3.0.0
+widgetsnbextension==4.0.9
+wrapt==1.15.0
+yarl==1.9.2
+zipp==3.17.0
+
+# The following packages are considered to be unsafe in a requirements file:
+# setuptools