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Fix end-of-file: trailing newlines on all notebooks and JSON
All 16 notebooks and 16 JSON result files now end with LF. Prevents pre-commit end-of-file-fixer failures on CI. Co-Authored-By: Arcane Sapience <protoscience@anulum.li>
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experiments/mpc_on_neurolib_results.json

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"sim_duration_ms": 30000,
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"K": 2.0,
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"mpc_horizon": 20,
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"honest_assessment": "Trivial result: R~0.40 is already below degradation threshold (0.6), so MPC correctly predicts 'degradation continues' in 98% of windows. This is not genuine prediction of transitions it is recognizing that the system is already degraded. A meaningful MPC test requires a system that crosses the threshold, not one that stays below it."
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"honest_assessment": "Trivial result: R~0.40 is already below degradation threshold (0.6), so MPC correctly predicts 'degradation continues' in 98% of windows. This is not genuine prediction of transitions \u2014 it is recognizing that the system is already degraded. A meaningful MPC test requires a system that crosses the threshold, not one that stays below it."
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}

experiments/neurolib_fc_diagnostic_results.json

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"r": 0.0308
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}
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]
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}
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}

experiments/seizure_detection_results.json

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"detected": 4,
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"sensitivity": 1.0,
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"mean_R_change_ictal": 0.0248,
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"honest_assessment": "Trivially 100%: regime FSM fires ~9 transitions/min throughout the recording (532-542 total in 1h). Any 30s window contains ~4.5 transitions by chance. Pre-ictal detection is not discriminative specificity is near 0%. R change during seizure (+0.025) is within noise (std=0.16). The FSM thresholds need tuning for EEG dynamics, or a different detection criterion is needed.",
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"honest_assessment": "Trivially 100%: regime FSM fires ~9 transitions/min throughout the recording (532-542 total in 1h). Any 30s window contains ~4.5 transitions by chance. Pre-ictal detection is not discriminative \u2014 specificity is near 0%. R change during seizure (+0.025) is within noise (std=0.16). The FSM thresholds need tuning for EEG dynamics, or a different detection criterion is needed.",
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"seizures": [
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{
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"file": "chb01_03.edf",
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"earliest_detection_s": -26.0
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}
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]
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}

notebooks/12_autotune_pipeline.ipynb

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"nbformat": 4,
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"nbformat_minor": 4
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notebooks/13_ssgf_closure.ipynb

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"nbformat": 4,
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"nbformat_minor": 4
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}

notebooks/14_chimera_detection.ipynb

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"nbformat": 4,
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"nbformat_minor": 4
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}

notebooks/15_spectral_analysis.ipynb

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"nbformat": 4,
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"nbformat_minor": 4
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}

notebooks/16_sleep_staging.ipynb

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"nbformat": 4,
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"nbformat_minor": 4
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}

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