Upgrade dependencies

Author: aorwall

moatless/actions/list_files.py

@@ -178,7 +178,7 @@ async def execute(
                 if list_files_args.recursive:
                     # Get all files and directories recursively using find
                     # -xdev: don't cross filesystem boundaries
-                    dirs_command = f"find {target_dir} -xdev -type d | sort"
+                    dirs_command = f"find {target_dir} -xdev -type d | grep -v '^{escaped_target_dir}$' | sort"
                     if ignore_pattern:
                         dirs_command += ignore_pattern
                     files_command = f"find {target_dir} -xdev -type f | sort"

pyproject.toml

@@ -17,12 +17,12 @@ dependencies = [
     "tiktoken<2.0.0,>=0.11.0",
     "networkx<4.0,>=3.4",
     "tree-sitter==0.24.0",
-    "tree-sitter-python==0.23.6",
-    "tree-sitter-java==0.23.5",
+    "tree-sitter-python<1.0.0,>=0.23.6",
+    "tree-sitter-java<1.0.0,>=0.23.5",
     "rapidfuzz<4.0.0,>=3.13.0",
     "gitpython<4.0.0,>=3.1.45",
     "unidiff<1.0.0,>=0.7.5",
-    "python-dotenv==1.0.1",
+    "python-dotenv<2.0.0,>=1.0.1",
     "docstring-parser<1.0,>=0.17.0",
     "litellm<2.0.0,>=1.75.5.post1",
     "openai<2.0.0,>=1.99.9",
@@ -47,7 +47,6 @@ dependencies = [
     "opentelemetry-instrumentation-fastapi<1.0,>=0.57b0",
     "fastapi>=0.116.1",
     "uvicorn>=0.35.0",
-    "dotenv>=0.9.9",
     "botocore<2.0.0,>=1.37.3",
     "boto3<2.0.0,>=1.37.3",
     "aioboto3<15.0.0,>=14.3.0",
@@ -59,11 +58,11 @@ dependencies = [
 
 [dependency-groups]
 dev = [
-    "pytest==8.3.2",
-    "pytest-mock==3.14.0",
+    "pytest<9.0.0,>=8.3.2",
+    "pytest-mock<4.0.0,>=3.14.0",
     "pytest-asyncio<1.0.0,>=0.25.3",
-    "mypy==1.15.0",
-    "ruff==0.5.5",
+    "mypy<2.0.0,>=1.15.0",
+    "ruff<1.0.0,>=0.5.5",
     "pylint<4.0.0,>=3.2.6",
     "ipykernel<7.0.0,>=6.29.5",
 ]