diff --git a/src/test/isolation2/isolation2_schedule b/src/test/isolation2/isolation2_schedule
index f9e6082ff45..8931e46a5fc 100644
--- a/src/test/isolation2/isolation2_schedule
+++ b/src/test/isolation2/isolation2_schedule
@@ -267,8 +267,10 @@ test: reindex/reindextable_while_altertable_ao_part_btree reindex/reindextable_w
 # upstream also has this issue, so disable them for now
 # test: reindex/reindextable_while_dropindex_ao_part_btree reindex/reindextable_while_dropindex_heap_part_btree reindex/reindextable_while_dropindex_aoco_part_btree
 
-test: reindex/reindextable_while_reindex_idx_ao_part_btree reindex/reindextable_while_reindex_idx_heap_part_btree reindex/reindextable_while_reindex_idx_aoco_part_btree
-test: reindex/reindextable_while_reindex_idx_ao_bitmap reindex/reindextable_while_reindex_idx_heap_bitmap reindex/reindextable_while_reindex_idx_aoco_bitmap
+# flaky tests: the tests prefixed with "reindextable_while_reindex_idx" may failed, and the reason of failed is not related to MVCC.
+ignore: reindex/reindextable_while_reindex_idx_ao_part_btree reindex/reindextable_while_reindex_idx_heap_part_btree reindex/reindextable_while_reindex_idx_aoco_part_btree
+ignore: reindex/reindextable_while_reindex_idx_ao_bitmap reindex/reindextable_while_reindex_idx_heap_bitmap reindex/reindextable_while_reindex_idx_aoco_bitmap
+
 test: reindex/serializable_reindex_with_drop_column_heap
 test: reindex/serializable_reindex_with_drop_index_ao reindex/serializable_reindex_with_drop_index_heap
 test: reindex/repeatable_read_reindex_with_insert_heap
diff --git a/src/test/regress/expected/aggregates.out b/src/test/regress/expected/aggregates.out
index f81478dabd4..91dba471eeb 100644
--- a/src/test/regress/expected/aggregates.out
+++ b/src/test/regress/expected/aggregates.out
@@ -3264,6 +3264,8 @@ drop table agg_hash_3;
 drop table agg_hash_4;
 -- GitHub issue https://github.com/greenplum-db/gpdb/issues/12061
 -- numsegments of the general locus should be -1 on create_minmaxagg_path
+set enable_indexscan = off;
+set enable_indexonlyscan = off;
 explain analyze select count(*) from pg_class, (select count(*) > 0 from (select count(*) from pg_class where relnatts > 8) x) y;
                                                       QUERY PLAN                                                       
 -----------------------------------------------------------------------------------------------------------------------
@@ -3279,6 +3281,8 @@ explain analyze select count(*) from pg_class, (select count(*) > 0 from (select
  Execution Time: 0.302 ms
 (10 rows)
 
+reset enable_indexscan;
+reset enable_indexonlyscan;
 -- test aggno
 create table tgb1(v1 int, v2 int, v3 int);
 NOTICE:  Table doesn't have 'DISTRIBUTED BY' clause -- Using column named 'v1' as the Apache Cloudberry data distribution key for this table.
diff --git a/src/test/regress/expected/aggregates_optimizer.out b/src/test/regress/expected/aggregates_optimizer.out
index a840742448b..a832e48e940 100644
--- a/src/test/regress/expected/aggregates_optimizer.out
+++ b/src/test/regress/expected/aggregates_optimizer.out
@@ -3430,6 +3430,8 @@ drop table agg_hash_3;
 drop table agg_hash_4;
 -- GitHub issue https://github.com/greenplum-db/gpdb/issues/12061
 -- numsegments of the general locus should be -1 on create_minmaxagg_path
+set enable_indexscan = off;
+set enable_indexonlyscan = off;
 explain analyze select count(*) from pg_class, (select count(*) > 0 from (select count(*) from pg_class where relnatts > 8) x) y;
 INFO:  GPORCA failed to produce a plan, falling back to Postgres-based planner
 DETAIL:  Falling back to Postgres-based planner because GPORCA does not support the following feature: Queries on master-only tables
@@ -3448,6 +3450,8 @@ DETAIL:  Falling back to Postgres-based planner because GPORCA does not support
  Execution Time: 0.198 ms
 (11 rows)
 
+reset enable_indexscan;
+reset enable_indexonlyscan;
 -- test aggno
 create table tgb1(v1 int, v2 int, v3 int);
 NOTICE:  Table doesn't have 'DISTRIBUTED BY' clause -- Using column named 'v1' as the Apache Cloudberry data distribution key for this table.
diff --git a/src/test/regress/sql/aggregates.sql b/src/test/regress/sql/aggregates.sql
index 7229bbb6128..600ff0282e0 100644
--- a/src/test/regress/sql/aggregates.sql
+++ b/src/test/regress/sql/aggregates.sql
@@ -1446,7 +1446,11 @@ drop table agg_hash_4;
 
 -- GitHub issue https://github.com/greenplum-db/gpdb/issues/12061
 -- numsegments of the general locus should be -1 on create_minmaxagg_path
+set enable_indexscan = off;
+set enable_indexonlyscan = off;
 explain analyze select count(*) from pg_class, (select count(*) > 0 from (select count(*) from pg_class where relnatts > 8) x) y;
+reset enable_indexscan;
+reset enable_indexonlyscan;
 
 -- test aggno
 create table tgb1(v1 int, v2 int, v3 int);