Update repository references from incubator-gluten to gluten after TLP graduation

Replace all references to the old incubator repository paths:
- apache/incubator-gluten -> apache/gluten
- apache/incubator-gluten-site -> apache/gluten-site
- incubator-gluten directory/path references -> gluten

This covers pom.xml, CI workflows, documentation, Docker files,
build scripts, source code comments, and configuration files.

Part of: #11713

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

Author: weiting-chen

.github/ISSUE_TEMPLATE/config.yml

@@ -16,5 +16,5 @@
 blank_issues_enabled: false
 contact_links:
   - name: Gluten Discussions
-    url: https://github.com/apache/incubator-gluten/discussions
+    url: https://github.com/apache/gluten/discussions
     about: Ask questions or discuss new feature ideas here.

.github/PULL_REQUEST_TEMPLATE

@@ -2,7 +2,7 @@
 Thank you for submitting a pull request! Here are some tips:
 
 1. For first-time contributors, please read our contributing guide:
-   https://github.com/apache/incubator-gluten/blob/main/CONTRIBUTING.md
+   https://github.com/apache/gluten/blob/main/CONTRIBUTING.md
 2. If necessary, create a GitHub issue for discussion beforehand to avoid duplicate work.
 3. If the PR is specific to a single backend, include [VL] or [CH] in the PR title to indicate the
    Velox or ClickHouse backend, respectively.

.github/workflows/dev_cron/pr_issue_linker.js

@@ -29,7 +29,7 @@ function detectIssueID(title) {
 }
 
 async function appendToPRDescription(github, context, pullRequestNumber, issuesID) {
-  const issueURL = `https://github.com/apache/incubator-gluten/issues/${issuesID}`;
+  const issueURL = `https://github.com/apache/gluten/issues/${issuesID}`;
   const issueReference = `#${issuesID}`
 
   // Fetch the current PR description.

.github/workflows/velox_weekly.yml

@@ -62,7 +62,7 @@ jobs:
           export PATH=$JAVA_HOME/bin:$PATH
           
           # action/checkout does not work centos7 anymore, so we clone the branch instead.
-          git clone -b main --depth=1 https://github.com/apache/incubator-gluten.git && cd incubator-gluten/
+          git clone -b main --depth=1 https://github.com/apache/gluten.git && cd gluten/
           if [ ${{ github.event_name }} = "pull_request" ]; then
             git fetch origin ${{ github.ref }}:pr_branch && git checkout pr_branch
           fi

.idea/vcs.xml

@@ -44,15 +44,15 @@ please add at least one UT to ensure code quality and reduce regression issues f
 
 Please update document for your proposed code change if necessary.
 
-If a new config property is being introduced, please update [Configuration.md](https://github.com/apache/incubator-gluten/blob/main/docs/Configuration.md).
+If a new config property is being introduced, please update [Configuration.md](https://github.com/apache/gluten/blob/main/docs/Configuration.md).
 
 ### Code Style
 
 ##### Java/Scala code style
-Developer can import the code style setting to IDE and format Java/Scala code with spotless maven plugin. See [Java/Scala code style](https://github.com/apache/incubator-gluten/blob/main/docs/developers/NewToGluten.md#javascala-code-style).
+Developer can import the code style setting to IDE and format Java/Scala code with spotless maven plugin. See [Java/Scala code style](https://github.com/apache/gluten/blob/main/docs/developers/NewToGluten.md#javascala-code-style).
 
 ##### C/C++ code style
-There are some code style conventions need to comply. See [CppCodingStyle.md](https://github.com/apache/incubator-gluten/blob/main/docs/developers/CppCodingStyle.md).
+There are some code style conventions need to comply. See [CppCodingStyle.md](https://github.com/apache/gluten/blob/main/docs/developers/CppCodingStyle.md).
 
 For Velox backend, developer can just execute `dev/formatcppcode.sh` to format C/C++ code. It requires `clang-format-15`
 installed in your development env.
@@ -68,7 +68,7 @@ You can execute a script to fix license header issue, as the following shows.
 ### Gluten CI
 
 ##### ClickHouse Backend CI
-To check CI failure for CH backend, please log in with the public account/password provided [here](https://github.com/apache/incubator-gluten/blob/main/docs/get-started/ClickHouse.md#new-ci-system).
+To check CI failure for CH backend, please log in with the public account/password provided [here](https://github.com/apache/gluten/blob/main/docs/get-started/ClickHouse.md#new-ci-system).
 To re-trigger CH CI, please post the below comment on PR page:
 
 `Run Gluten Clickhouse CI`
@@ -79,7 +79,7 @@ To check CI failure for Velox backend, please go into the GitHub action page fro
 To see the perf. impact on Velox backend, you can comment `/Benchmark Velox` on PR page to trigger a pretest. The benchmark
 (currently TPC-H) result will be posted after completed.
 
-If some new dependency is required to be installed, you may need to do some change for CI docker at [this folder](https://github.com/apache/incubator-gluten/tree/main/tools/gluten-te).
+If some new dependency is required to be installed, you may need to do some change for CI docker at [this folder](https://github.com/apache/gluten/tree/main/tools/gluten-te).
 
 ### Code Review
 

CONTRIBUTING.md

@@ -126,7 +126,7 @@ to view past discussions, or [subscribe to the mailing list](mailto:dev-subscrib
 
 ### Slack Channel (English)
 
-Request an invitation to the ASF Slack workspace via [this page](https://github.com/apache/incubator-gluten/discussions/8429). Once invited, you can join the **incubator-gluten** channel.
+Request an invitation to the ASF Slack workspace via [this page](https://github.com/apache/gluten/discussions/8429). Once invited, you can join the **gluten** channel.
 
 The ASF Slack login entry: https://the-asf.slack.com/.
 
@@ -166,6 +166,6 @@ Gluten is licensed under [Apache License Version 2.0](https://www.apache.org/lic
 
 Gluten was initiated by Intel and Kyligence in 2022. Several other companies are also actively contributing to its development, including BIGO, Meituan, Alibaba Cloud, NetEase, Baidu, Microsoft, IBM, Google, etc.
 
-<a href="https://github.com/apache/incubator-gluten/graphs/contributors">
-  <img src="https://contrib.rocks/image?repo=apache/incubator-gluten&columns=25" />
+<a href="https://github.com/apache/gluten/graphs/contributors">
+  <img src="https://contrib.rocks/image?repo=apache/gluten&columns=25" />
 </a>

README.md

@@ -164,7 +164,23 @@ object CHRuleApi {
   }
 
   /**
-   * Since https://github.com/apache/incubator-gluten/pull/883.
+   * Registers Gluten's columnar rules. These rules will be executed only when RAS (relational
+   * algebra selector) is enabled by spark.gluten.ras.enabled=true.
+   *
+   * These rules are covered by CI test job spark-test-spark35-ras.
+   */
+  private def injectRas(injector: RasInjector): Unit = {
+    // CH backend doesn't work with RAS at the moment. Inject a rule that aborts any
+    // execution calls.
+    injector.injectPreTransform(
+      _ =>
+        new SparkPlanRules.AbortRule(
+          "Clickhouse backend doesn't yet have RAS support, please try disabling RAS and" +
+            " rerunning the application"))
+  }
+
+  /**
+   * Since https://github.com/apache/gluten/pull/883.
    *
    * TODO: Remove this since tricky to maintain.
    */

backends-clickhouse/src/main/scala/org/apache/gluten/backendsapi/clickhouse/CHRuleApi.scala

@@ -114,7 +114,7 @@ object CHValidatorApi {
    * and make it into a new column which the shuffle will refer to. But we need to remove it from
    * the result columns from the shuffle.
    *
-   * Since https://github.com/apache/incubator-gluten/pull/1071.
+   * Since https://github.com/apache/gluten/pull/1071.
    */
   def supportShuffleWithProject(outputPartitioning: Partitioning, child: SparkPlan): Boolean = {
     child match {

backends-clickhouse/src/main/scala/org/apache/gluten/backendsapi/clickhouse/CHValidatorApi.scala

@@ -29,7 +29,7 @@ case class CHColumnarToCarrierRowExec(override val child: SparkPlan)
   override def rowType(): Convention.RowType = CHCarrierRowType
   override protected def withNewChildInternal(newChild: SparkPlan): SparkPlan =
     copy(child = newChild)
-  // Since https://github.com/apache/incubator-gluten/pull/1595.
+  // Since https://github.com/apache/gluten/pull/1595.
   override protected def doExecuteColumnar(): RDD[ColumnarBatch] = {
     if (child.supportsColumnar) {
       child.executeColumnar()