Home

Welcome to the trajectories-alignment documentation wiki!

To start with trajalign, read first how to install it.

---

If you use this software, please cite:

Picco, A., Kaksonen, M., Precise tracking of the dynamics of multiple proteins in endocytic events, Methods in Cell Biology, Vol. 139, pages 51-68 (2017)

---

Content:

• The trajectory class

• Average trajectories together

• Align average trajectories together

Examples:

• An example of use of the trajectory class

• An example of the averaging of trajectories

• [An example of the alignment of average trajectories](Example-of-trajectory-alignment

---

External links:

Github software repository

Python

Kaksonen laboratory

References:

Picco and Kaksonen, Methods in Cell Biology 2017

Kukulski, Picco, et al., eLife 2016

Picco, et al., eLife 2015