unsplice matrix for RNA segmentation

[ZhangHongbo-Lab]

awesome notebook for RNA segmentation, I just wondering how to generate the spliced and unspliced matrix for RNA segmentation by using the SAW output file? Thanks.

[ZhangHongbo-Lab]

Additionally, Can I apply the RNA segmentation on data after 3D models reconstruction? Namely, running RNA segmentation for bins into single cell on 3D coordination.