CI #1143
Annotations
10 errors, 6 warnings, and 1 notice
|
Documentation:
../../../.julia/packages/DocumenterInterLinks/XD21f/src/interlinks.jl#L238
Could not load inventory "NCDatasets" from any available sources.
sources = ("https://alexander-barth.github.io/NCDatasets.jl/stable/objects.inv",)
|
|
Documentation:
src/inference_data.jl#L289
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/src/inference_data.jl:289-317
```jldoctest cat
julia> coords = (; a_dim=["x", "y", "z"]);
julia> dims = dims=(; a=[:a_dim]);
julia> data = Dict(:a => randn(100, 4, 3), :b => randn(100, 4));
julia> idata = from_dict(data; coords=coords, dims=dims)
InferenceData with groups:
> posterior
julia> idata_cat1 = cat(idata, idata; dims=:chain)
InferenceData with groups:
> posterior
julia> idata_cat1.posterior
╭─────────────────╮
│ 100×8×3 Dataset │
├─────────────────┴──────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered
├──────────────────────────────────────────────────── layers ┤
:a eltype: Float64 dims: draw, chain, a_dim size: 100×8×3
:b eltype: Float64 dims: draw, chain size: 100×8
├────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
```
Subexpression:
idata_cat1.posterior
Evaluated output:
┌ 100×8×3 Dataset ┐
├─────────────────┴──────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered
├──────────────────────────────────────────────────── layers ┤
:a eltype: Float64 dims: draw, chain, a_dim size: 100×8×3
:b eltype: Float64 dims: draw, chain size: 100×8
├────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2025-01-20T00:55:54.128"
Expected output:
╭─────────────────╮
│ 100×8×3 Dataset │
├─────────────────┴──────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered
├──────────────────────────────────────────────────── layers ┤
:a eltype: Float64 dims: draw, chain, a_dim size: 100×8×3
:b eltype: Float64 dims: draw, chain size: 100×8
├────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
diff =
Warning: Diff output requires color.
╭─────────────────╮
│ ┌ 100×8×3 Dataset │
┐
├─────────────────┴──────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered
├──────────────────────────────────────────────────── layers ┤
:a eltype: Float64 dims: draw, chain, a_dim size: 100×8×3
:b eltype: Float64 dims: draw, chain size: 100×8
├────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434""2025-01-20T00:55:54.128"
|
|
Documentation:
src/inference_data.jl#L321
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/src/inference_data.jl:321-340
```jldoctest cat
julia> idata_cat2 = cat(idata, idata; dims=:run)
InferenceData with groups:
> posterior
julia> idata_cat2.posterior
╭───────────────────╮
│ 100×4×3×2 Dataset │
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
```
Subexpression:
idata_cat2.posterior
Evaluated output:
┌ 100×4×3×2 Dataset ┐
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2025-01-20T00:55:54.128"
Expected output:
╭───────────────────╮
│ 100×4×3×2 Dataset │
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
diff =
Warning: Diff output requires color.
╭───────────────────╮
│ ┌ 100×4×3×2 Dataset │
┐
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434""2025-01-20T00:55:54.128"
|
|
Documentation:
src/inference_data.jl#L346
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/src/inference_data.jl:346-384
```jldoctest cat
julia> observed_data = Dict(:y => randn(10));
julia> idata2 = from_dict(data; observed_data=observed_data, coords=coords, dims=dims)
InferenceData with groups:
> posterior
> observed_data
julia> idata_cat3 = cat(idata, idata2; groups=(:posterior,), dims=:run)
InferenceData with groups:
> posterior
> observed_data
julia> idata_cat3.posterior
╭───────────────────╮
│ 100×4×3×2 Dataset │
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
julia> idata_cat3.observed_data
╭────────────────────╮
│ 10-element Dataset │
├────────────── dims ┤
↓ y_dim_1
├────────────────────┴─────────────── layers ┐
:y eltype: Float64 dims: y_dim_1 size: 10
├────────────────────────────────────────────┴ metadata ┐
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:53.539"
```
Subexpression:
idata_cat3.posterior
Evaluated output:
┌ 100×4×3×2 Dataset ┐
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2025-01-20T00:55:54.128"
Expected output:
╭───────────────────╮
│ 100×4×3×2 Dataset │
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
diff =
Warning: Diff output requires color.
╭───────────────────╮
│ ┌ 100×4×3×2 Dataset │
┐
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434""2025-01-20T00:55:54.128"
|
|
Documentation:
src/inference_data.jl#L346
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/src/inference_data.jl:346-384
```jldoctest cat
julia> observed_data = Dict(:y => randn(10));
julia> idata2 = from_dict(data; observed_data=observed_data, coords=coords, dims=dims)
InferenceData with groups:
> posterior
> observed_data
julia> idata_cat3 = cat(idata, idata2; groups=(:posterior,), dims=:run)
InferenceData with groups:
> posterior
> observed_data
julia> idata_cat3.posterior
╭───────────────────╮
│ 100×4×3×2 Dataset │
├───────────────────┴─────────────────────────────────── dims ┐
↓ draw ,
→ chain,
↗ a_dim Categorical{String} ["x", "y", "z"] ForwardOrdered,
⬔ run
├─────────────────────────────────────────────────────────────┴ layers ┐
:a eltype: Float64 dims: draw, chain, a_dim, run size: 100×4×3×2
:b eltype: Float64 dims: draw, chain, run size: 100×4×2
├──────────────────────────────────────────────────────────── metadata ┤
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:48.434"
julia> idata_cat3.observed_data
╭────────────────────╮
│ 10-element Dataset │
├────────────── dims ┤
↓ y_dim_1
├────────────────────┴─────────────── layers ┐
:y eltype: Float64 dims: y_dim_1 size: 10
├────────────────────────────────────────────┴ metadata ┐
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:53.539"
```
Subexpression:
idata_cat3.observed_data
Evaluated output:
┌ 10-element Dataset ┐
├────────────── dims ┤
↓ y_dim_1
├────────────────────┴─────────────── layers ┐
:y eltype: Float64 dims: y_dim_1 size: 10
├────────────────────────────────────────────┴ metadata ┐
Dict{String, Any} with 1 entry:
"created_at" => "2025-01-20T00:55:59.347"
Expected output:
╭────────────────────╮
│ 10-element Dataset │
├────────────── dims ┤
↓ y_dim_1
├────────────────────┴─────────────── layers ┐
:y eltype: Float64 dims: y_dim_1 size: 10
├────────────────────────────────────────────┴ metadata ┐
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:53.539"
diff =
Warning: Diff output requires color.
╭────────────────────╮
│ ┌ 10-element Dataset │
┐
├────────────── dims ┤
↓ y_dim_1
├────────────────────┴─────────────── layers ┐
:y eltype: Float64 dims: y_dim_1 size: 10
├────────────────────────────────────────────┴ metadata ┐
Dict{String, Any} with 1 entry:
"created_at" => "2024-03-11T14:10:53.539""2025-01-20T00:55:59.347"
|
|
Documentation:
ext/InferenceObjectsPosteriorStatsExt/summarize.jl#L29
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/ext/InferenceObjectsPosteriorStatsExt/summarize.jl:29-48
```jldoctest summarize
julia> using ArviZExampleData, PosteriorStats, StatsBase
julia> data = load_example_data("centered_eight");
julia> summarize(data)
SummaryStats
mean std hdi_3% hdi_97% mcse_mean mcse_std ess ⋯
mu 4.5 3.5 -1.62 10.7 0.23 0.11 ⋯
theta[Choate] 6.5 5.9 -4.56 17.1 0.30 0.29 ⋯
theta[Deerfield] 5.0 4.9 -4.31 14.3 0.23 0.17 ⋯
theta[Phillips Andover] 3.9 5.7 -7.77 13.7 0.23 0.28 ⋯
theta[Phillips Exeter] 4.9 5.0 -4.49 14.7 0.26 0.17 ⋯
theta[Hotchkiss] 3.7 5.0 -6.47 11.7 0.25 0.16 ⋯
theta[Lawrenceville] 4.0 5.2 -7.04 12.2 0.22 0.22 ⋯
theta[St. Paul's] 6.6 5.1 -3.09 16.3 0.30 0.19 ⋯
theta[Mt. Hermon] 4.8 5.7 -5.86 16.0 0.26 0.25 ⋯
tau 4.1 3.1 0.896 9.67 0.26 0.17 ⋯
3 columns omitted
```
Subexpression:
summarize(data)
Evaluated output:
SummaryStats
mean std hdi_3% hdi_97% mcse_mean mcse_std ess ⋯
mu 4.2 3.3 -1.61 10.3 0.21 0.088 ⋯
theta[Choate] 6.4 5.9 -3.68 17.9 0.25 0.20 ⋯
theta[Deerfield] 5.0 4.9 -4.98 13.4 0.21 0.15 ⋯
theta[Phillips Andover] 3.4 5.4 -7.54 12.9 0.23 0.17 ⋯
theta[Phillips Exeter] 4.8 5.2 -5.11 14.1 0.21 0.21 ⋯
theta[Hotchkiss] 3.5 4.8 -6.12 12.0 0.25 0.15 ⋯
theta[Lawrenceville] 3.7 5.2 -6.50 12.7 0.22 0.21 ⋯
theta[St. Paul's] 6.5 5.2 -2.67 16.9 0.22 0.15 ⋯
theta[Mt. Hermon] 4.8 5.7 -5.97 15.4 0.24 0.23 ⋯
tau 4.3 3.0 0.715 9.41 0.22 0.14 ⋯
3 columns omitted
Expected output:
SummaryStats
mean std hdi_3% hdi_97% mcse_mean mcse_std ess ⋯
mu 4.5 3.5 -1.62 10.7 0.23 0.11 ⋯
theta[Choate] 6.5 5.9 -4.56 17.1 0.30 0.29 ⋯
theta[Deerfield] 5.0 4.9 -4.31 14.3 0.23 0.17 ⋯
theta[Phillips Andover] 3.9 5.7 -7.77 13.7 0.23 0.28 ⋯
theta[Phillips Exeter] 4.9 5.0 -4.49 14.7 0.26 0.17 ⋯
theta[Hotchkiss] 3.7 5.0 -6.47 11.7 0.25 0.16 ⋯
theta[Lawrenceville] 4.0 5.2 -7.04 12.2 0.22 0.22 ⋯
theta[St. Paul's] 6.6 5.1 -3.09 16.3 0.30 0.19 ⋯
theta[Mt. Hermon] 4.8 5.7 -5.86 16.0 0.26 0.25 ⋯
tau 4.1 3.1 0.896 9.67 0.26 0.17 ⋯
3 columns omitted
diff =
Warning: Diff output requires color.
SummaryStats
mean std hdi_3% hdi_97% mcse_mean mcse_std ess ⋯
mu 4.5 3.5 -1.62 10.7 0.23 0.11 4.2 3.3 -1.61 10.3 0.21 0.088 ⋯
theta[Choate] 6.5 6.4 5.9 -4.56 17.1 0.30 0.29 -3.68 17.9 0.25 0.20 ⋯
theta[Deerfield] 5.0 4.9 -4.31 14.3 0.23 0.17 -4.98 13.4 0.21 0.15 ⋯
theta[Phillips Andover] 3.9 5.7 -7.77 13.7 0.23 0.28 3.4 5.4 -7.54 12.9 0.23 0.17 ⋯
theta[Phillips Exeter] 4.9 5.0 -4.49 14.7 0.26 0.17 4.8 5.2 -5.1
|
|
Documentation:
ext/InferenceObjectsPosteriorStatsExt/summarize.jl#L53
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/ext/InferenceObjectsPosteriorStatsExt/summarize.jl:53-65
```jldoctest summarize
julia> summarize(data.posterior[(:theta,)], (:mean, :std) => mean_and_std, median, mad)
SummaryStats
mean std median mad
theta[Choate] 6.46 5.87 6.08 4.64
theta[Deerfield] 5.03 4.88 5.01 4.96
theta[Phillips Andover] 3.94 5.69 4.23 4.67
theta[Phillips Exeter] 4.87 5.01 5.02 4.82
theta[Hotchkiss] 3.67 4.96 3.89 4.70
theta[Lawrenceville] 3.97 5.19 4.14 4.64
theta[St. Paul's] 6.58 5.11 6.07 4.47
theta[Mt. Hermon] 4.77 5.74 4.71 4.95
```
Subexpression:
summarize(data.posterior[(:theta,)], (:mean, :std) => mean_and_std, median, mad)
Evaluated output:
SummaryStats
mean std median mad
theta[Choate] 6.42 5.85 5.80 4.95
theta[Deerfield] 4.95 4.91 5.02 4.68
theta[Phillips Andover] 3.42 5.43 3.74 4.84
theta[Phillips Exeter] 4.75 5.25 4.69 4.84
theta[Hotchkiss] 3.45 4.78 3.62 4.55
theta[Lawrenceville] 3.66 5.23 3.90 4.88
theta[St. Paul's] 6.51 5.24 6.09 4.57
theta[Mt. Hermon] 4.82 5.70 4.65 4.89
Expected output:
SummaryStats
mean std median mad
theta[Choate] 6.46 5.87 6.08 4.64
theta[Deerfield] 5.03 4.88 5.01 4.96
theta[Phillips Andover] 3.94 5.69 4.23 4.67
theta[Phillips Exeter] 4.87 5.01 5.02 4.82
theta[Hotchkiss] 3.67 4.96 3.89 4.70
theta[Lawrenceville] 3.97 5.19 4.14 4.64
theta[St. Paul's] 6.58 5.11 6.07 4.47
theta[Mt. Hermon] 4.77 5.74 4.71 4.95
diff =
Warning: Diff output requires color.
SummaryStats
mean std median mad
theta[Choate] 6.46 5.87 6.08 4.64
6.42 5.85 5.80 4.95
theta[Deerfield] 5.03 4.88 5.01 4.96
4.95 4.91 5.02 4.68
theta[Phillips Andover] 3.94 5.69 4.23 4.67
3.42 5.43 3.74 4.84
theta[Phillips Exeter] 4.87 5.01 5.02 4.82
4.75 5.25 4.69 4.84
theta[Hotchkiss] 3.67 4.96 3.89 4.70
3.45 4.78 3.62 4.55
theta[Lawrenceville] 3.97 5.19 4.14 4.64
3.66 5.23 3.90 4.88
theta[St. Paul's] 6.58 5.11 6.07 4.47
6.51 5.24 6.09 4.57
theta[Mt. Hermon] 4.77 5.74 4.71 4.954.82 5.70 4.65 4.89
|
|
Documentation:
ext/InferenceObjectsPosteriorStatsExt/loo.jl#L15
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/ext/InferenceObjectsPosteriorStatsExt/loo.jl:15-30
```jldoctest
julia> using ArviZExampleData, PosteriorStats
julia> idata = load_example_data("centered_eight");
julia> loo(idata)
PSISLOOResult with estimates
elpd elpd_mcse p p_mcse
-31 1.4 0.9 0.34
and PSISResult with 500 draws, 4 chains, and 8 parameters
Pareto shape (k) diagnostic values:
Count Min. ESS
(-Inf, 0.5] good 6 (75.0%) 135
(0.5, 0.7] okay 2 (25.0%) 421
```
Subexpression:
loo(idata)
Evaluated output:
PSISLOOResult with estimates
elpd elpd_mcse p p_mcse
-31 1.4 0.9 0.33
and PSISResult with 500 draws, 4 chains, and 8 parameters
Pareto shape (k) diagnostic values:
Count Min. ESS
(-Inf, 0.5] good 4 (50.0%) 270
(0.5, 0.7] okay 4 (50.0%) 307
Expected output:
PSISLOOResult with estimates
elpd elpd_mcse p p_mcse
-31 1.4 0.9 0.34
and PSISResult with 500 draws, 4 chains, and 8 parameters
Pareto shape (k) diagnostic values:
Count Min. ESS
(-Inf, 0.5] good 6 (75.0%) 135
(0.5, 0.7] okay 2 (25.0%) 421
diff =
Warning: Diff output requires color.
PSISLOOResult with estimates
elpd elpd_mcse p p_mcse
-31 1.4 0.9 0.34
0.33
and PSISResult with 500 draws, 4 chains, and 8 parameters
Pareto shape (k) diagnostic values:
Count Min. ESS
(-Inf, 0.5] good 6 (75.0%) 135
4 (50.0%) 270
(0.5, 0.7] okay 2 (25.0%) 4214 (50.0%) 307
|
|
Documentation:
ext/InferenceObjectsPosteriorStatsExt/loo_pit.jl#L21
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/ext/InferenceObjectsPosteriorStatsExt/loo_pit.jl:21-42
```jldoctest
julia> using ArviZExampleData, PosteriorStats
julia> idata = load_example_data("centered_eight");
julia> loo_result = loo(idata; var_name=:obs);
julia> loo_pit(idata, loo_result.psis_result.log_weights; y_name=:obs)
╭────────────────────────────────────────────╮
│ 8-element DimArray{Float64, 1} loo_pit_obs │
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
"Deerfield" 0.63797
"Phillips Andover" 0.316697
"Phillips Exeter" 0.582252
"Hotchkiss" 0.295321
"Lawrenceville" 0.403318
"St. Paul's" 0.902508
"Mt. Hermon" 0.655275
```
Subexpression:
loo_pit(idata, loo_result.psis_result.log_weights; y_name=:obs)
Evaluated output:
┌ 8-element DimArray{Float64, 1} loo_pit_obs ┐
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.942759
"Deerfield" 0.641057
"Phillips Andover" 0.32729
"Phillips Exeter" 0.581451
"Hotchkiss" 0.288523
"Lawrenceville" 0.393741
"St. Paul's" 0.886175
"Mt. Hermon" 0.638821
Expected output:
╭────────────────────────────────────────────╮
│ 8-element DimArray{Float64, 1} loo_pit_obs │
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
"Deerfield" 0.63797
"Phillips Andover" 0.316697
"Phillips Exeter" 0.582252
"Hotchkiss" 0.295321
"Lawrenceville" 0.403318
"St. Paul's" 0.902508
"Mt. Hermon" 0.655275
diff =
Warning: Diff output requires color.
╭────────────────────────────────────────────╮
│ ┌ 8-element DimArray{Float64, 1} loo_pit_obs │
┐
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
0.942759
"Deerfield" 0.63797
0.641057
"Phillips Andover" 0.316697
0.32729
"Phillips Exeter" 0.582252
0.581451
"Hotchkiss" 0.295321
0.288523
"Lawrenceville" 0.403318
0.393741
"St. Paul's" 0.902508
0.886175
"Mt. Hermon" 0.6552750.638821
|
|
Documentation:
ext/InferenceObjectsPosteriorStatsExt/loo_pit.jl#L83
doctest failure in ~/work/InferenceObjects.jl/InferenceObjects.jl/ext/InferenceObjectsPosteriorStatsExt/loo_pit.jl:83-102
```jldoctest
julia> using ArviZExampleData, PosteriorStats
julia> idata = load_example_data("centered_eight");
julia> loo_pit(idata; y_name=:obs)
╭────────────────────────────────────────────╮
│ 8-element DimArray{Float64, 1} loo_pit_obs │
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
"Deerfield" 0.63797
"Phillips Andover" 0.316697
"Phillips Exeter" 0.582252
"Hotchkiss" 0.295321
"Lawrenceville" 0.403318
"St. Paul's" 0.902508
"Mt. Hermon" 0.655275
```
Subexpression:
loo_pit(idata; y_name=:obs)
Evaluated output:
┌ 8-element DimArray{Float64, 1} loo_pit_obs ┐
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.942759
"Deerfield" 0.641057
"Phillips Andover" 0.32729
"Phillips Exeter" 0.581451
"Hotchkiss" 0.288523
"Lawrenceville" 0.393741
"St. Paul's" 0.886175
"Mt. Hermon" 0.638821
Expected output:
╭────────────────────────────────────────────╮
│ 8-element DimArray{Float64, 1} loo_pit_obs │
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
"Deerfield" 0.63797
"Phillips Andover" 0.316697
"Phillips Exeter" 0.582252
"Hotchkiss" 0.295321
"Lawrenceville" 0.403318
"St. Paul's" 0.902508
"Mt. Hermon" 0.655275
diff =
Warning: Diff output requires color.
╭────────────────────────────────────────────╮
│ ┌ 8-element DimArray{Float64, 1} loo_pit_obs │
┐
├────────────────────────────────────────────┴─────────────────────────── dims ┐
↓ school Categorical{String} [Choate, Deerfield, …, St. Paul's, Mt. Hermon] Unordered
└──────────────────────────────────────────────────────────────────────────────┘
"Choate" 0.943511
0.942759
"Deerfield" 0.63797
0.641057
"Phillips Andover" 0.316697
0.32729
"Phillips Exeter" 0.582252
0.581451
"Hotchkiss" 0.295321
0.288523
"Lawrenceville" 0.403318
0.393741
"St. Paul's" 0.902508
0.886175
"Mt. Hermon" 0.6552750.638821
|
|
Documentation:
../../../.julia/packages/DocumenterInterLinks/XD21f/src/interlinks.jl#L233
Failed to load inventory "NCDatasets" from possible source "https://alexander-barth.github.io/NCDatasets.jl/stable/objects.inv".
exception = RequestError: HTTP/2 404 while requesting https://alexander-barth.github.io/NCDatasets.jl/stable/objects.inv
|
|
Julia 1.9 - ubuntu-latest - x64 - schedule
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
|
Downgrade / Julia 1.9 - ubuntu-latest - x64 - schedule
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
|
Julia 1 - ubuntu-latest - x64 - schedule
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
|
Julia pre - ubuntu-latest - x64 - schedule
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
|
Julia 1 - macOS-latest - x64 - schedule
[setup-julia] x64 arch has been requested on a macOS runner that has an arm64 (Apple Silicon) architecture. You may have meant to use the "aarch64" arch instead (or left it unspecified for the correct default).
|
|
[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache To ignore, set input `ignore-no-cache: true`
|