PmOmpH-Modeller/build_profile.ali at master · astroomics/PmOmpH-Modeller · GitHub

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>P1;PmOmpH
sequence:PmOmpH:    0: :    0: :::-1.00:-1.00
MKKTIVALAVAAVAATSANAATVYNQDGTKVDVNGSVRLLLKKEKDKRGDLMDNGSRVSFKASHDLGEGLSALAY
AELRFSKDVKNKDGEVIKQPIGNNVHAKRLYAGFAYEGVGTLTFGNQLTIGDDVGVSDYTYFLGGINNLLSSGEK
AINFKSAEFNGLTFGGAYVFSDDFDKNGLRDGRGFVVAGLYNRKIGDVGFAFEAGYSQKYVKQEVASVLPPPPGS
VTVYKDEKEKAFMVGAELSYAGLALGVDYAQSKVTNVDGKKRALEVGLNYDINDKAKVYTDFIWAKEGPKGATTR
DRSIILGAGYKLHKQVETFVEGGWGREKDANGVTTKDNVVGVGLRVHF*

>P1;6eneA
structure:6eneA:    1: :  328: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLYGKAVGLHYFSDNDGNDGDKTYARLGFKGETKINDQLT--GY
GQWEYNFQGNNSEGADAQS--GNK--TRLAFAGLKFGDAGSFDYGNYGLVYDAIGITDMLPEFGGVSDNFFSGRT
GATYRNSGFDGLNFGVQYLRTDALRSNGSYDFDGFGIVGAYNLQWGKGDKAEQWATGLKYDANNIAALYGEMRNA
ARLDNGNKTQDFSVVAQYQFFGLRPSIAYYKSKAKDVEGYINYIDIGATYYFNKNMSTYVDYNQLKDDNKLGINN
DDTVAVGLVYQ-------------------------------------*

>P1;4auiA
structure:4auiA:   33: :  308: :::-1.00:-1.00
-------------------------------------------------EIADLGSKIGFKGQEDLGNGLKAI--
WQLEQKAYVSGTD-----TGWGNRQSFIGLKGGFGKVRVGRL--NNILKDTGNFNPWEGKSYYSGLSNIAQPEER
SVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYH----AGFNYKNDG-----FFVQYAGSYKRHN-----------
---YTTEKHQVHLVGGDALYASVA--VQQQDAKLTWRDDNSHNSQTEVATTVAYRFGNVTPRVSYAHGFKGSNTY
DQ-VVVGAEYDFSKRTSALVSAGW-LQKGKGAEKFVATVGGVGLRHKF*

>P1;1phoA
structure:1phoA:    1: :  330: :::-1.00:-1.00
--------------------AEIYNKDGNKLDVYGKVKAMMSDNASKDGD--QSYIRFGFKGETQINDQLTGYGR
WEAEFAGNKAESDTAQQK--------TRLAFAGLKYKDLGSFDYGRNLGALYDVEATDMFPEFGGTDNFMTKRAS
GLTYRNTDFFGV-IDGLNLTLQYQGKNENRDGDGFGTSLTYD--FGGSDFAISGAYSDRTNEQNLQS-----RGT
-----GKRAEAWATGLKYDANNIYLATFYSETKMTPITGKTQNFEAVAQYQFDFGLRPSLGYVLSKKDIEGIGDE
DNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNNNDDIVAVGMTYQF*

>P1;4d65A
structure:4d65A:    1: :  343: :::-1.00:-1.00
--------------------AEVYNKDGNKLDVYGQIDVRHYFADAKSGDGDDSRVRLGFKGDTQITDQLIGFG-
---RFEWETSTNKAET-----SNDNQNRLAYAGLKFADYGSLDYGRNYGVGADTMDQEDTFMMGRNRNLLTYRN-
--NNGFGYIDGLSFALQYTGSSALDNNG--DGYGFSTA----YELG-WGLSIGGGYSN-------SSRTPSQNNI
KTGATGKRAEAWNVGSKLELDELYLAAMYGQTLNTTIANKTENLELVALYSFDTPSIGYNQSKGKNLGNYGNKDL
VKYIAVGASYDFNKNMAAVIDYKINLLKDNQGINT-DNVLGLGLIYQF*

>P1;3vy8X
structure:3vy8X:   36: :  337: :::-1.00:-1.00
--------------------------------------------------IADFGSKIGFKGQEDLGNGMKAIWQ
LEQKASIAGTNSGW-------GNRQSFIGLKGGF-----GTVRAGNLNTVGDNVNASNTEDVLGGTIGRVESREI
SVRYDSPVFAGFSGSVQYVPRDDVDKKHTKSSRESYHAGL---KYENAGFFGQAGSFAKYADLNTAERVAVNTAN
AHPVKDYQVHRVVAGYDANDLYVSVAGQYEAAKVGSIKGKKHAYRFGVSYAHGFKAKV--------NGVKDANYQ
YDQVIVGADYDFSKRTSALVSAGWLKQKGAGKVEQTASMVGL------*

>P1;5o77A
structure:5o77A:    1: :  337: :::-1.00:-1.00
--------------------AEIYNKNGNKLDFYG--KMVGEHVWTTNGDTSSDDARIGLKGETQINDQL--IGY
GQWEYNMDASNVEG-------SQTTKTRLAFAGLKAGEYGSFDYGNYGAIYDVEAATDMLVEWGGTDNYMTGRTN
GVTYRNSDFDGLSFALQYQGKNDHDRARKQNGDGFSTAATY---AFDNGIALSAGYSSSN-----RSVDQKADGN
-----GDKAEAWATSAKYDANNIYAAVMYSQTEDNHFAGKTQNFEAVVQYQFDFGLRPSIGYVQTKQSRAGFSGG
DADLVVGTWYYFNKNMNVYAAYKFNQLDDAAGVAT-DDQAAVGIVYQF*

>P1;6ehbA
structure:6ehbA:   12: :  207: :::-1.00:-1.00
--------------------STVYSAKGTSLEVGGRAEARLSL---KDGKAQDNSRRLNFLGKAEINDSLYGVGF
YE-----------GEFTTNDQGKNASNNSLDNRYTYAGIGG-TYG-EVTYGKNDGITDFTDIMSRVDNMLALGVK
A-SYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYT--FGDTGFNVGAGYADQ----------------
---------------------------------------------------------------------------
------------------------------------------------*

>P1;6ehcA
structure:6ehcA:    1: :  196: :::-1.00:-1.00
--------------------STVYSAKGTSLEVGGRAEARLSL---KDGKAQDNSRRLNFLGKAEINDSLYGVGF
YE-----------GEFTTNDQGKNASNNSLDNRYTYAGIGG-TYG-EVTYGKNDGITDFTDIMSRVDNMLALGVK
A-SYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYT--FGDTGFNVGAGYADQ----------------
---------------------------------------------------------------------------
------------------------------------------------*

>P1;6eheA
structure:6eheA:    1: :  302: :::-1.00:-1.00
--------------------------DAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAGVDANYTVNDSLALQGK
VEFAL-KD----SGDMY---VRNHILGVK-------TNFGKFSFGKQWTTSDDVYGADYSYFFGGTGLRYGTLSD
ALHDSQVKYDSFWVKAGYGFPEDNAKQEL--------AELYGATFGDL--AVHAGGGQN--RDKAFKVGSNTVGT
TTIKADVTNSYFEVTGEYTIGDALIGVTYAELDVENID--EDAISVAGTYKVADKTKLYAGYEYVQEANTGADED
GTLVYLGVEYKFASWARVYAEYGYG-----DGTTDSANNFGIGARYYW*

>P1;6ehdA
structure:6ehdA:    1: :  322: :::-1.00:-1.00
--------------------AEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAGVDANYTVNDSLALQGK
VEFAL------KDMYVRNHILGVKTN------------FGKFSFGKQWTTSDDVYGADYSYFFGGTGLRYGTLSD
ALHDSQVKYDSFWVKAGYGFPEDNAKQEL--------AELYGATFGDL--AVHAGGGQN--RDKAFKVGSNTVGT
TTIKADVTNSYFEVTGEYTIGDALIGVTYAELDVENID--EDAISVAGTYKVADKTKLYAGYEYVQEANTGADED
GTLVYLGVEYKFASWARVYAEYGYGKGSDAEVKATKANNFGIGARYYW*

>P1;5nxrA
structure:5nxrA:    1: :  352: :::-1.00:-1.00
--------------------AEVYNKDGNKLDVYGKVDVADKGKKSEDGD--DSRVRLGVKGDTQITDQLTGFG-
---RFEWETKTNKAE----NEGENKN-RLAYAGLKFADFGSIDYGRNYGVVYDTNAWTDVFPLWGTDNFMTSRNR
NLNNAFGYVDGLSFALQYQGKNDNNKSSAGDGYGFSTA----YELG-WGVTLGGGYSSSRTPNQKAGVVTSEGDS
YYSATGKRAQAWNVGGKFDANNVYLAAMYGQTQNTSIANKTENVELVAQYDFGLKPSIGYNQSKGKNLGNGYDNQ
DKYISVGSYYYFNKNMSAVVDYKINLLKDNDGINT-DNVLGLGLVYQF*

>P1;3nsgA
structure:3nsgA:    3: :  341: :::-1.00:-1.00
----------------------IYNKDGNKLDLYGKAHVWTTTGDSKNAD--QTYAQIGFKGETQINTDLTGFGQ
WEYRTKAD--RAEGE---QQNSNLV--RLAFAGLKYAEVGSIDYGRNYGIVYD--VESYTYFSGETNYMTSRAGG
LLTYRNSDFDGLSFGIQYQGKNQ-DNHSINDGVGYTMAYEFD------GFGVTAAYSNSKRTNDQQD----RDGN
-----GDRAESRAVGAKYDANNVYLAAVYAETRTVEMANKTQNLEVVAQYQFDFGLRPAISYVQSKNGAGGSADL
AKYIQAGATYYFNKNMNVWVDYRFNDENDSSSYVGTDDQAAVGITYQF*

>P1;2j1nA
structure:2j1nA:    1: :  346: :::-1.00:-1.00
--------------------AEVYNKDGNKLDLYGKVDGLFSDNKDVDGD--QTYMRLGFKGETQVTDQLT--GY
GQWEYQIQGNSAENE-------NNSWTRVAFAGLKFQDVGSFDYGRNYGVVYD--VTSWTDVLGSDNFMQQRGNG
FATYRNTDFFGLVDGLNFAVQYQ-GKNGNPSGEGF-TSGVTNRQNGDVGGSITYDYEGFGIGGAISSSKRTDAQN
TAAYNGDRAETYTGGLKYDANNIYLAAQYTQTNATRVGNKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYD
DEDILVGATYYFNKNMSTYVDYKINLLDDNQGINT-DNIVALGLVYQF*

>P1;3uu2A
structure:3uu2A:    1: :  298: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLFGKVDGLHYFSDDKGSDGDQTYMRIGFKGETQVNDQLT--GY
GQWEYQIQGNQTEG-------SNDSWTRVAFAGLKFADAGSFDYGRNYGVTYDVSWTDVLPEFGG------DTYG
ADNFMQQRGNG------YATYRNTDFFGLVDGLDFALQ--YQGK-GD-GY----GGSLTYAIGEGFSV----GGA
ITT---SKATVYTGGLKYDANNIYLAAQYSQTYAQN-------FEVVAQYQFDFGLRPSVAYLQSKSNGYGASYG
DQDIVVGATYYFNKNMSTYVDYKINLTRDA-GINT-DDIVALGLVYQF*

>P1;6v78A
structure:6v78A:    1: :  353: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFGFKGETQINDMLT--GY
GQWEYNVQANNTETS------SDQAWTRLAFAGIKVGDYGSFDYGRNYGVLYDVGWTDMLPEFGG-----DSYTY
ADNFMAGRANGV---ATYRNSDFF---GLVEGLNFALVGTNNRSSSDVRFSYDFGMGISAAAAYTSSDRTNDQMT
QTNARGDKAEAWTAGLKYDANDIYLATMYSETRNDGVANKTQNFEVTAQYQFDFGLRPAISYLQSKDLYNNGRYA
DKDLVVGATYYFNRNMSTYVDDGNDKFYEDNGIST-DNIVALGLVYQF*

>P1;3upgA
structure:3upgA:    1: :  311: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLFGKVDGLHYFSDDKGSDGDQTYMRIGFKGETQVNDQLT--GY
GQWEYQIQGNQTEG-------SNDSWTRVAFAGLKFADAGSFDYGRNYGVTYDVSWTDVLPEFGG------DTYG
ADNFMQQRGNG------YATYRNTDFFGLVDGLDFALQ--YQGK-GD-GY----GGSLTYAIGEGFSV----GGA
ITT---SKATVYTGGLKYDANNIYLAAQYSQTGTSGFANKAQNFEVVAQYQFDFGLRPSVAYLQSKSNGYGASYG
DQDIVVGATYYFNKNMSTYVDYKINLTRDA-GINT-DDIVALGLVYQF*

>P1;5fvnA
structure:5fvnA:    1: :  342: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLYGKVDGLHYFSDDDSQDGDQTYMRLGFKGETQVNDQLT--GY
GQWEY--QIQGNSGE-----NENNSWTRVAFAGLKFGDAGSFDYGRNYGVVYD--VTSWTDVLGSDNFMQQRGNG
FATYRNSDFDGLNFAVQYASGEDQTNNGRTELRGDGVGGSITYNLGE-GFGIGTAVS--------SSKRTSSQND
LTYGNGDRAETYTGGLKYDANNIYLAAQYTQTRVGNLGNKAQNFEVVAQYQFDFGLRPSVAYLQSKENGYGDQDL
LKYVDVGATYYFNKNMSTYVDYKINKEFTRNAGISTDDIVALGLVYQF*

>P1;3wi5A
structure:3wi5A:    8: :  312: :::-1.00:-1.00
------------IKAGVETSRSVFHQNGQVTEVTTAT------------GIVDLGSKIGFKGQEDLGNGLKAIWQ
VEQKAS--IAGTD-----SGWGNRQSFIGLKGGFGKLRVGRL--NSVLKDTGDINPWDSKSDYLGVNKIAEPEAR
SVRYDSPEFAGLSGSVQYALND----NAGRHNSESYHAG-FNYKNGGFFVQYGGAYKRHHQVQEGLNI-------
------EKYQIHRLVSDALYASVAVQQQDAKTDASNSHNSQTEVAATLAYRFGN----VTPRVSYAHGFKGLVNR
YDQVVVGAEYDFSKRTSALVSAGWLQEKGENKFVA--TAGGVGLRHKF*

>P1;2zfgA
structure:2zfgA:    1: :  313: :::-1.00:-1.00
--------------------AEIYNKDGNKVDLYGKAVGLHYFSKGGENSYGGNGARLGFKGETQINSDLTGYGQ
WEYNF----QGNNSEGADAQTGNK--TRLAFAGLKYADVGSFDYGRNYGVGGDTAYSD-DFFVGRVGGVAT----
---YRNSNFDGLNFAVQYLGKNERDSNG--DGEGFGIVGAYGQPLGNTGLKYDANLAANYGETRNATPITNKFTN
TSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGLVNYFEVGATYYFNKNMSTYVDYI------------
------------------------------------------------*

>P1;5o9cC
structure:5o9cC:    1: :  348: :::-1.00:-1.00
--------------------------DGNKLDLYGKIDGLHYFSSDDSVDGDQTYMRIGVKGETQINDQLT--GY
GQWEYNVQANNTESS------SDQAWTRLAFAGLKFGDAGSFDYGRNYGVVYD--VTSWTDVLGSDNFLQSRANG
VATYRNSDFDGLNFALQYVSGEDQTNNGKQNGEGFGTSVTYDIWDGSAGFAYSS--SKRTDEQNNSTFVSKTDGG
GVLGEGDHAETYTGGLKYDANNIYLATQYTQTRTGNIGNKAQNFEVVAQYQFDFGLRPSVAYLQSK-GKDMGRYG
DQDILLGATYYFNKNMSTYVDYKINLTKDAS--ISTDNVVALGLVYQF*

>P1;7pzfA
structure:7pzfA:    2: :  347: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLYGKIDGLHYFSDDKSVDGDQTYMRVGVKGETQINDQLT--GY
GQWEYNVQANNTESS------SDQAWTRLAFAGLKFGDAGSFDYGRNYGVVYDVGGDTDTY--GSDNFLQSRANG
VATYRNSDFFGLVDGLNFALQYQ-GKNGSVSGEGATNNGRWSKQNGD-GFGISAGFAYSHSKRTDEQNSVPALG-
----RGDNAETYTGGLKYDANNIYLASQYTQTYNATRAGKAQNFEVVAQYQFDFGLRPSVAYLQSKDLERGYGDQ
DKYVDVGATYYFNKNMSTYVDYKINLLDDNSGIST-DDVVALGLVYQF*

>P1;1gfnA
structure:1gfnA:    1: :  301: :::-1.00:-1.00
--------------------AEIYNKDGNKVDLYGAVGLHYFSKGNGENSYGGNGARLGFKGETQINSDLTGYGQ
WEYNF----QGNNSEGADAQTGNK--TRLAFAGLKYADVGSFDYGNYGVVYDALPYSD-DFFVGRVGGVAT----
---YRNSNFDGLNFAVQYLGKNERDSNG--DGEGFGIVGAYGQPLGNTGLKYDANLAANYGETRNATPITNKFTN
TSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGLVNYFEVGATYYFNKNMSTYVDYI------------
------------------------------------------------*

>P1;2xe1A
structure:2xe1A:    1: :  354: :::-1.00:-1.00
--------------------AEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQ
WEYQIQGNAPESE---------NNSWTRVAFAGLKFQDIGSFDYGRNYGVVYD--VTSWTDVLGSDNFMQQRGNG
FATYRNTDFFGLVDGLNFAVQYQ-GQNGSVSGENFTGHGITNRQNGDVGGSITYDYEGFGVGAAVSSSKRTWDQN
NTIGTGDRAETYTGGLKYDANNIYLAAQYTQTNATRVGNKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVVAD
DEDILVGATYYFNKNMSTYVDYKINLLDDAAGINT-DDIVALGLVYQF*

>P1;2xe5A
structure:2xe5A:    1: :  343: :::-1.00:-1.00
--------------------AEIYNKDGNKLDLYGKVEGLFSDNDSKDGD--KTYMRLGFKGETQVTDQLTGYGQ
WEYQIQGNEPESD---------NSSWTRVAFAGLKFQDVGSFDYGNYGVVYDVTSWTDVLPEFGGDNFMQQRGNG
FATYRNTDFFGLVDGLDFAVQYQ-GKNGSAHGEGMTTNGVFEQNGDGVGGSITYNYEGFGIGAAVSSSKRTWDQN
NTIGTGDRAETYTGGLKYDANNIYLAAQYTQTNATRVGNKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYD
DEDILVGATYYFNKNMSTYVDYKINLLDDNRGINT-DDIVALGLVYQF*