An easy way to get the whole genome expected interaction matrix

[zhangylab]

FitHiChIP is an explicit and clearly written normalization method for HiChIP data processing.
Beyond significant loop calling, I want to develop a genome-wide background model by using FitHiChIP-produced bias, regression coefficients and splines.
So I wander how to access these regression coefficients and splines in addition to the bias values in an easy way.
Thanks.

[ay-lab]

Hi @zhangylab
Please check the outputs "Bin_Info.log" and "*.interactions_FitHiC.bed" in the FitHiChIP output folder.