update

Author: wlangera

source/pipelines/biodiversity_indicators/_targets.R

@@ -77,7 +77,8 @@ list(
     data_cubes,
     process_cube(data,
                  cols_occurrences = "n"),
-    pattern = map(data)
+    pattern = map(data),
+    iteration = "list"
   ),
   tar_target(
     obs_richness_map,

source/pipelines/biodiversity_indicators/_targets/meta/meta

@@ -50,11 +50,6 @@ data_6eafae49e97811b6|branch|76a8b80f74402517|4473cbe572d2b471|3f416c9f2ad70039|
 data_be1675c01c6e7f25|branch|8ccc3225aeda1e54|4473cbe572d2b471|dd111a10036713f6|-719191508||t20406.6517892759s|s1783507b|1783507|qs|local|vector|data||0.16||
 data|pattern|6dd59621445bb39c|4473cbe572d2b471||33550471||||35273431|qs|local|vector||data_08c515db9c4b5bf7*data_1dcf0e1e5dd6bbeb*data_6eafae49e97811b6*data_be1675c01c6e7f25|0.67||
 spec_occ_map_c8c7d569dcd26c74|branch||70da23dec145062a|1de2bb0e1344f347|302565825||t20193.5752464068s||0|qs|local|vector|spec_occ_map||0||Object class not recognized. Must be one of the following: processed_cube or processed_cube_dsinfo or sim_cube.
-data_cubes_c8c7d569dcd26c74|branch|998197ab395de32e|fb496adf1a659eac|1de2bb0e1344f347|-1538137835||t20406.6964602396s|s623247b|623247|qs|local|vector|data_cubes||0.41||
-data_cubes_68d4bb4ebc5d6490|branch|5c1fca260945ee5e|fb496adf1a659eac|9d89d7b70492b756|408272700||t20406.6964647508s|s415154b|415154|qs|local|vector|data_cubes||0.33||
-data_cubes_eeb7f4677167472b|branch|a5d254c5b8b8875c|fb496adf1a659eac|7af4102606996744|-1519866088||t20406.6966990111s|s39598416b|39598416|qs|local|vector|data_cubes||16.63||
-data_cubes_437a9436adf92ba2|branch|5d40b1a051870b26|fb496adf1a659eac|bf61de1fa3c5a350|-687975218||t20406.6967179534s|s2218967b|2218967|qs|local|vector|data_cubes||1.27||
-data_cubes|pattern|9acef9aefba3ca13|fb496adf1a659eac||-1039925631||||42855784|qs|local|vector||data_cubes_c8c7d569dcd26c74*data_cubes_68d4bb4ebc5d6490*data_cubes_eeb7f4677167472b*data_cubes_437a9436adf92ba2|18.64||
 filter1_c8c7d569dcd26c74|branch|8761804cc63b7742|cca699f3c9647249|cde3988fa6cad08e|-969674854||t20406.6967197706s|s463059b|463059|qs|local|vector|filter1||0||
 filter1_68d4bb4ebc5d6490|branch|e83b0ab3d60c6be2|cca699f3c9647249|de6c730ed2975c13|203989247||t20406.6967203724s|s304195b|304195|qs|local|vector|filter1||0.02||
 filter1_eeb7f4677167472b|branch|fe78b828a953b7c9|cca699f3c9647249|2af2aadc501767a8|-1287669431||t20406.696753273s|s22065009b|22065009|qs|local|vector|filter1||0.26||
@@ -113,14 +108,6 @@ spec_range_ts_ebfeebaa3e17d293|branch|c00c67a816d1b6ec|e49f384e32bd115a|4510c53a
 spec_range_ts_0af481d5c4cd9eea|branch|7e88ee716fe02c3d|e49f384e32bd115a|29c5093aad2bdabc|-728656706||t20407.3614656655s|s122853b|122853|qs|local|vector|spec_range_ts||226||
 spec_range_ts_7c5ea9287d06e208|branch|6d41ba9eeb13ece5|e49f384e32bd115a|ac1901443f89b41b|1072627323||t20407.3617404025s|s117366b|117366|qs|local|vector|spec_range_ts||23.56||
 spec_range_ts|pattern|f9deb527c9e3b003|e49f384e32bd115a||1899864952||||324787|qs|local|vector||spec_range_ts_70d34382ead4ea05*spec_range_ts_ebfeebaa3e17d293*spec_range_ts_0af481d5c4cd9eea*spec_range_ts_7c5ea9287d06e208|265.79||
-read_andid|function|b8b692d7024b4ef2
-path_to_interim|function|896498708f2f22fa
-add_cyclus|function|dff241668b4366c0
-path_to_data|object|de49ac0f4411477d
-filter_1|function|2287eecfa0eab226
-filter_2|function|c1df51c70662a707
-filter_3|function|fc3344380f45dfcb
-targets_project_dir|object|4e9c20c139fb718b
 spec_range_map_70d34382ead4ea05|branch|991f3534306cddd1|b0f9fd489bb8c569|59371a6b9fafc6f9|-1154570202||t20407.3672768283s|s291201b|291201|qs|local|vector|spec_range_map||4.81||
 spec_range_map_ebfeebaa3e17d293|branch|3f88e844bb6522fa|b0f9fd489bb8c569|4510c53a22ccdd91|-1780023250||t20407.367304687s|s55880b|55880|qs|local|vector|spec_range_map||2.16||
 spec_range_map_0af481d5c4cd9eea|branch|4d0fd3c5165b4b64|b0f9fd489bb8c569|29c5093aad2bdabc|1178962200||t20407.3692993263s|s7097216b|7097216|qs|local|vector|spec_range_map||168.23||
@@ -136,3 +123,16 @@ obs_richness_ts_ebfeebaa3e17d293|branch|7f7c76486da84346|5d1bcc18a534dac0|4510c5
 obs_richness_ts_0af481d5c4cd9eea|branch|fba4ec4c1308ec71|5d1bcc18a534dac0|29c5093aad2bdabc|1905341264||t20407.3723681245s|s7161b|7161|qs|local|vector|obs_richness_ts||0.86|Bootstrapped confidence intervals cannot be calculated for the chosen indicator.|
 obs_richness_ts_7c5ea9287d06e208|branch|00ce7512fda643fd|5d1bcc18a534dac0|ac1901443f89b41b|1723768177||t20407.3723709534s|s7177b|7177|qs|local|vector|obs_richness_ts||0.07|Bootstrapped confidence intervals cannot be calculated for the chosen indicator.|
 obs_richness_ts|pattern|ba2bb6c4e1e5e8a9|5d1bcc18a534dac0||-1832753236||||19351|qs|local|vector||obs_richness_ts_70d34382ead4ea05*obs_richness_ts_ebfeebaa3e17d293*obs_richness_ts_0af481d5c4cd9eea*obs_richness_ts_7c5ea9287d06e208|1||
+read_andid|function|b8b692d7024b4ef2
+path_to_interim|function|896498708f2f22fa
+add_cyclus|function|dff241668b4366c0
+path_to_data|object|de49ac0f4411477d
+filter_1|function|2287eecfa0eab226
+filter_2|function|c1df51c70662a707
+filter_3|function|fc3344380f45dfcb
+targets_project_dir|object|4e9c20c139fb718b
+data_cubes_c8c7d569dcd26c74|branch|998197ab395de32e|fb496adf1a659eac|1de2bb0e1344f347|-1538137835||t20407.3899434854s|s623247b|623247|qs|local|list|data_cubes||0.44||
+data_cubes_68d4bb4ebc5d6490|branch|5c1fca260945ee5e|fb496adf1a659eac|9d89d7b70492b756|408272700||t20407.389947491s|s415154b|415154|qs|local|list|data_cubes||0.28||
+data_cubes_eeb7f4677167472b|branch|a5d254c5b8b8875c|fb496adf1a659eac|7af4102606996744|-1519866088||t20407.3901801609s|s39598416b|39598416|qs|local|list|data_cubes||16.5||
+data_cubes_437a9436adf92ba2|branch|5d40b1a051870b26|fb496adf1a659eac|bf61de1fa3c5a350|-687975218||t20407.3901960896s|s2218967b|2218967|qs|local|list|data_cubes||1.09||
+data_cubes|pattern|2b695d09b8f3df5f|fb496adf1a659eac||-1039925631||||42855784|qs|local|list||data_cubes_c8c7d569dcd26c74*data_cubes_68d4bb4ebc5d6490*data_cubes_eeb7f4677167472b*data_cubes_437a9436adf92ba2|18.31||