If you have multiple jobs (or a matrix), I find that the bazelisk and repository caches conflict on their initial creation. In the case of bazelisk, each job attempts to write an identical bazelisk cache, one succeeds, and the others all report a warning. This also occurs for the repository caches, but I think these shouldn't even be shared. Different jobs might build different targets and end up fetching different dependencies.
One solution might be to add a cache-key option that all caches use (but allow disk-cache to still override this, for backwards compatibility). An alternative solution would be to try to hide that warning for bazelisk, and recommend using an initial bazel fetch job to populate the cache.
Some example warnings:
