fix: tab format and linting

Author: migrau

docs/Cluster_basics/Submitting_jobs/Qmap.md

@@ -11,81 +11,94 @@ How to submit jobs to the Cluster using **Qmap**.
 
 ### 1. Prepare .qmap file (example)
 
-   === "IRB cluster"    
-     
+=== "IRB cluster"
+
     ```bash 
     [params]
-	memory=50G
-    
-	[pre]
-	ml load anaconda3
-	conda activate sciclone-env
-  
-	[jobs]
-	Rscript run.R ../data/vafs.dat bmm 3 ./results.beta.3
-	Rscript run.R ../data/vafs.dat gaussian.bmm 3 ./results.gaussian.3
-	Rscript run.R ../data/vafs.dat binomial.bmm 3 ./results.binomial.3
-	```
-   === "BBG cluster"    
-   
+    memory=50G
+
+    [pre]
+    ml load anaconda3
+    conda activate sciclone-env
+
+    [jobs]
+    Rscript run.R ../data/vafs.dat bmm 3 ./results.beta.3
+    Rscript run.R ../data/vafs.dat gaussian.bmm 3 ./results.gaussian.3
+    Rscript run.R ../data/vafs.dat binomial.bmm 3 ./results.binomial.3
+    ```
+
+=== "BBG cluster"
+
     ```bash
     [params]
-	memory=50G
-    
-	[pre]
-	. "/home/$USER/miniconda3/etc/profile.d/conda.sh"
-	conda activate sciclone-env
-    
-	[jobs]
-	Rscript run.R ../data/vafs.dat bmm 3 ./results.beta.3
-	Rscript run.R ../data/vafs.dat gaussian.bmm 3 ./results.gaussian.3
-	Rscript run.R ../data/vafs.dat binomial.bmm 3 ./results.binomial.3
-	```
+    memory=50G
+
+    [pre]
+    . "/home/$USER/miniconda3/etc/profile.d/conda.sh"
+    conda activate sciclone-env
+
+    [jobs]
+    Rscript run.R ../data/vafs.dat bmm 3 ./results.beta.3
+    Rscript run.R ../data/vafs.dat gaussian.bmm 3 ./results.gaussian.3
+    Rscript run.R ../data/vafs.dat binomial.bmm 3 ./results.binomial.3
+    ```
+
+The only difference is how you load Conda. On the IRB cluster, you can use either of the following options:
+
+ 1) Use the pre-installed conda module (`ml load anaconda3`), or
+
+ 2) If you use mamba, load it the same way you do with conda on the BBG cluster:
+
+  `. "/home/$USER/miniforge3/etc/profile.d/conda.sh"`
+
+   For micromamba:
+
+  `eval "$(micromamba shell hook --shell=bash)"`
 
 ### 2. Run "qmap submit" from the login node
 
-   === "IRB cluster"
-    
+=== "IRB cluster"
+
     ```bash 
     interactive
     spack load py-qmap
     qmap submit filename.qmap
-	```
-   === "BBG cluster"
-    
-    ```bash
-	qmap submit filename.qmap
-	```
-        
+    ```
 
+=== "BBG cluster"
 
-## Aditional info
+    ```bash
+    qmap submit filename.qmap
+    ```
+
+## Additional info
 
 ### Extra parameters
 
 If you need to provide any [extra parameter](https://qmap.readthedocs.io/en/latest/concepts.html#parameters) directly to
 SLURM, you can do it defining a new profile.config file. E.g.
 
-   === "IRB cluster"    
-    
-    ```toml 
+=== "IRB cluster"
+
+    ```bash
     executor = slurm
 
     [params]
-	extra = -G 1
-	```
-   === "BBG cluster"    
+    extra = -G 1
+    ```
 
-    ```toml
+=== "BBG cluster"
+
+    ```bash
     executor = slurm
 
-	[params]
-	extra = -p bigmem
-	```
-				
-				
-By default, the queue used in the bbgcluster is `bigrun`.    
-For qmap runs using gpus, `-G 1`
+    [params]
+    extra = -p bigmem
+    ```
+
+By default, the queue used in the BBG cluster is `bigrun`.
+
+For Qmap runs using GPUs, use `-G 1`.
 
 ## Reference