Misspellings and formatting errors in synonym columns #358
Description
Problem
Several synonym values in src/templates/metpo_sheet.tsv contain misspellings or formatting inconsistencies.
Misspellings
| METPO ID | Label | Column | Current Value | Fix |
|---|---|---|---|---|
| METPO:1000687 | branched shaped | Madin (col 11) | branced |
branched |
| METPO:1000604 | microaerophilic | BactoTraits (col 15) | Ox_microerophile |
Ox_microaerophile (verify against BactoTraits source first) |
German form in exact synonyms
8 temperature bin classes (METPO:1000443-1000446, 1000450-1000453) have Mesophilie as a confirmed exact synonym (col 9). This is the German form; English should be Mesophilic or Mesophile. Verify whether these were transcribed from a German-language source.
Missing prefix
| METPO ID | Label | Column | Current Value | Expected |
|---|---|---|---|---|
| METPO:1000464 | pH range high | BactoTraits (col 15) | 10_to_14 |
pHR_10_to_14 (all sibling classes use pHR_ prefix) |
Notes
For METPO:1000604, check whether Ox_microerophile is the literal value from the BactoTraits database. If so, the misspelling is upstream and we should add a comment rather than "fix" it.
Found during MetaTraits entity additions audit (branch metatraits-entity-additions, PR #355).