Merge remote-tracking branch 'upstream/master' into BEP028_spec

Author: effigies

.all-contributorsrc

@@ -424,6 +424,9 @@
             "profile": "https://github.com/musicinmybrain"
         },
         {
+            "avatar_url": [
+                "https://avatars.githubusercontent.com/u/844306?v=4"
+            ],
             "contributions": [
                 "doc",
                 "code",
@@ -434,9 +437,6 @@
             "profile": "https://bendichter.com/"
         },
         {
-            "avatar_url": [
-                "https://avatars.githubusercontent.com/u/844306?v=4"
-            ],
             "contributions": [
                 "doc"
             ],
@@ -2190,37 +2190,13 @@
             "name": "Marco Castellaro",
             "profile": "https://github.com/marcocastellaro"
         },
-        {
-            "contributions": [
-                "blog",
-                "bug",
-                "code",
-                "doc",
-                "ideas",
-                "maintenance",
-                "review"
-            ],
-            "login": "margaret_e._heafield",
-            "name": "Margaret E. Heafield"
-        },
         {
             "contributions": [
                 "doc"
             ],
             "login": "maria_ermolova",
             "name": "Maria Ermolova"
         },
-        {
-            "contributions": [
-                "bug",
-                "doc",
-                "ideas",
-                "review"
-            ],
-            "login": "MarieCurie",
-            "name": "Maria Salomea Skłodowska",
-            "profile": "https://example.com"
-        },
         {
             "avatar_url": "https://avatars.githubusercontent.com/u/3390888?v=4",
             "contributions": [

.github/dependabot.yml

@@ -19,3 +19,15 @@ updates:
       interval: "monthly"
     labels:
       - "exclude-from-changelog"
+    groups:
+      build-dependencies:
+        patterns: ["*"]
+  - package-ecosystem: "npm"
+    directory: "/"
+    schedule:
+      interval: "monthly"
+    labels:
+      - "exclude-from-changelog"
+    groups:
+      node-utilities:
+        patterns: ["*"]

.github/workflows/changelog_generator.yml

@@ -32,7 +32,7 @@ jobs:
         with:
           fetch-depth: 0
           filter: "blob:none"
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
           python-version: 3
       - run: env

.github/workflows/publish_schema.yml

@@ -134,7 +134,7 @@ jobs:
       - uses: actions/checkout@v5
 
       - name: Set Up Python environment
-        uses: actions/setup-python@v5
+        uses: actions/setup-python@v6
         with:
           python-version: "3.11"
 

.github/workflows/schemacode_ci.yml

@@ -24,13 +24,13 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v5
-      - uses: actions/setup-node@v4
+      - uses: actions/setup-node@v5
         with:
           node-version: 22
       - name: Install dependencies
-        run: npm install `cat npm-requirements.txt`
+        run: npm install
       - name: Run style checks
-        run: npx remark src/**/*.md --frail --rc-path .remarkrc
+        run: npm run remark
 
   # YAML
   yamllint:
@@ -67,3 +67,5 @@ jobs:
       - uses: astral-sh/setup-uv@v6
       - name: Validate CITATION.cff
         run: uvx cffconvert --validate
+      - name: Check for Zenodo compatibility
+        run: uv run tools/validate_citation.py

.github/workflows/validation.yml

@@ -14,8 +14,6 @@ pdf_build_src/src_copy
 pdf_build_src/tests/data/output
 
 # JS/NPM
-package-lock.json
-package.json
 node_modules/
 
 # Python gitignore

.gitignore

@@ -17,7 +17,7 @@ repos:
       - id: check-added-large-files
       - id: check-case-conflict
   - repo: https://github.com/python-jsonschema/check-jsonschema
-    rev: 0.33.3
+    rev: 0.34.0
     hooks:
       - id: check-dependabot
       - id: check-github-workflows
@@ -49,7 +49,7 @@ repos:
       - id: codespell
         args: ["--config=.codespellrc", "--dictionary=-", "--dictionary=.codespell_dict"]
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.17.1
+    rev: v1.18.2
     hooks:
       - id: mypy
         # Sync with project.optional-dependencies.typing

.pre-commit-config.yaml

@@ -2281,39 +2281,13 @@
         "orcid": "0000-0002-1203-2670",
         "publish_email": true
     },
-    "margaret_e._heafield": {
-        "contributions": [
-            "blog",
-            "bug",
-            "code",
-            "doc",
-            "ideas",
-            "maintenance",
-            "review"
-        ],
-        "name": "Margaret E. Heafield"
-    },
     "maria_ermolova": {
         "contributions": [
             "doc"
         ],
         "email": "[email protected]",
         "name": "Maria Ermolova"
     },
-    "MarieCurie": {
-        "affiliation": "Open-Science University, Earth",
-        "blog": "https://example.com",
-        "contributions": [
-            "bug",
-            "doc",
-            "ideas",
-            "review"
-        ],
-        "email": "[email protected]",
-        "github": "MarieCurie",
-        "name": "Maria Salomea Skłodowska",
-        "orcid": "0320-4024-4203-5343"
-    },
     "maigva": {
         "affiliation": "FISABIO, Join Unit Biomedical Imagin, Valencia, Valencia, 46006, Spain",
         "blog": "https://bimcv.cipf.es",

.tributors

@@ -1069,17 +1069,9 @@ authors:
     orcid: https://orcid.org/0000-0002-1203-2670
     affiliation: University of Padova, Department of Information Engineering, Padova, Italy
     email: [email protected]
-  - given-names: Margaret E.
-    family-names: Heafield
   - given-names: Maria
     family-names: Ermolova
     email: [email protected]
-  - given-names: Maria
-    family-names: Salomea Skłodowska
-    website: https://example.com
-    orcid: https://orcid.org/0320-4024-4203-5343
-    affiliation: Open-Science University, Earth
-    email: [email protected]
   - given-names: Maria
     family-names: de la Iglesia
     website: https://bimcv.cipf.es