fix deptry:DEP003 transitive dependency warning

Author: Reece Hart

src/biocommons/eutils/sketchy/clientx.py

@@ -1,6 +1,6 @@
-# -*- coding: utf-8 -*-
+from .. import Client, EutilsError, EutilsNCBIError, EutilsNotFoundError
 
-from biocommons.eutils import Client, EutilsError, EutilsNCBIError, EutilsNotFoundError
+# ruff: noqa
 
 
 class ClientX(Client):
@@ -13,44 +13,28 @@ class ClientX(Client):
     """
 
     def fetch_gene_by_hgnc(self, hgnc):
-        query = 'human[orgn] AND {hgnc}[preferred symbol] AND "current only"[Filter]'.format(
-            hgnc=hgnc
-        )
+        query = f'human[orgn] AND {hgnc}[preferred symbol] AND "current only"[Filter]'
         esr = self.esearch(db="gene", term=query)
         if esr.count != 1:
             raise EutilsError(
-                "Received {n} search replies for gene {hgnc} (query: '{query}')".format(
-                    n=esr.count, hgnc=hgnc, query=query
-                )
+                f"Received {esr.count} search replies for gene {hgnc} (query: '{query}')"
             )
         gene = next(iter(self.efetch(db="gene", id=esr.ids[0])))
         if hgnc != gene.hgnc:
-            raise EutilsError(
-                "Queried for {q_hgnc}, got reply for gene {r_hgnc}".format(
-                    q_hgnc=hgnc, r_hgnc=gene.hgnc
-                )
-            )
+            raise EutilsError(f"Queried for {hgnc}, got reply for gene {gene.hgnc}")
         return gene
 
     def fetch_nuccore_by_ac(self, acv):
         query = acv
         db = "nuccore"
         esr = self.esearch(db=db, term=query)
         if esr.count > 1:
-            raise EutilsError(
-                "Received {n} replies for {acv} in database {db}".format(
-                    n=esr.count, acv=acv, db=db
-                )
-            )
+            raise EutilsError(f"Received {esr.count} replies for {acv} in database {db}")
         if esr.count == 0:
-            raise EutilsNotFoundError(
-                "No results for {query} in database {db}".format(query=query, db=db)
-            )
+            raise EutilsNotFoundError(f"No results for {query} in database {db}")
         gbseq = next(iter(self.efetch(db=db, id=esr.ids[0])))
         if acv != gbseq.acv:
-            raise EutilsNCBIError(
-                "Queried for {q_acv}, got reply for {r_acv}".format(q_acv=acv, r_acv=gbseq.acv)
-            )
+            raise EutilsNCBIError(f"Queried for {acv}, got reply for {gbseq.acv}")
         return gbseq
 
     fetch_gbseq_by_ac = fetch_nuccore_by_ac
@@ -60,9 +44,7 @@ def fetch_snps_for_gene(self, hgnc, organism="human"):
         esr = self.esearch(db=db, term="%s[gene name] AND %s[organism]" % (hgnc, organism))
         if esr.count == 0:
             raise EutilsNotFoundError(
-                "No results for gene {hgnc} and organism {o} in database {db}".format(
-                    hgnc=hgnc, o=organism, db=db
-                )
+                f"No results for gene {hgnc} and organism {organism} in database {db}"
             )
         return next(iter(self.efetch(db=db, id=",".join(map(str, esr.ids)))))