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updated schemas/$id
updated schemas/$id
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10 files changed

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-11
lines changed

10 files changed

+11
-11
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schemas/biocomputeobject.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/biocomputeobject.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/biocomputeobject.json",
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"type": "object",
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"title": "Base type for all BioCompute Objects",
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"description": "All BioCompute object types must adhear to this type in order to be compliant with BioCompute specification",
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"type": "string",
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"format": "date-time"
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},
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"sha1_chksum": {
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"sha1_checksum": {
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"type": "string",
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"description": "value of sha1 checksum of file",
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"pattern": "[A-Za-z0-9]+"

schemas/description_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/description_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/description_domain.json",
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"type": "object",
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"title": "Description Domain",
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"description": "Structured field for description of external references, the pipeline steps, and the relationship of I/O objects.",

schemas/error_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/error_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/error_domain.json",
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"type": "object",
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"title": "Error Domain",
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"description": "",

schemas/execution_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/execution_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/execution_domain.json",
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"type": "object",
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"title": "Execution Domain",
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"description": "The fields required for execution of the BCO are herein encapsulated together in order to clearly separate information needed for deployment, software configuration, and running applications in a dependent environment",

schemas/extension_domain/fhir_extension.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/extension_domain/fhir_extension.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/extension_domain/fhir_extension.json",
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"type": "object",
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"required": [
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"fhir_endpoint",

schemas/extension_domain/scm_extension.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/extension_domain/scm_extension.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/extension_domain/scm_extension.json",
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"type": "object",
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"required": [
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"scm_repository",

schemas/io_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/io_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/io_domain.json",
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"type": "object",
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"title": "Input and Output Domain",
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"description": "The list of global input and output files created by the computational workflow, excluding the intermediate files. Custom to every specific BCO implementation, these fields are pointers to objects that can reside in the system performing the computation or any other accessible system.",

schemas/parametric_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/parametric_domain",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/parametric_domain",
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"type": "array",
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"title": "Parametric Domain",
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"description": "This represents the list of NON-default parameters customizing the computational flow which can affect the output of the calculations. These fields can be custom to each kind of analysis and are tied to a particular pipeline implementation",

schemas/provenance_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/provenance_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/provenance_domain.json",
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"type": "object",
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"title": "Provenance Domain",
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"description": "Structured field for tracking data through transformations, including contributors, reviewers, and versioning.",

schemas/usability_domain.json

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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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"$id": "http://biocomputeobject.org/1.3.0/schemas/usability_domain.json",
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"$id": "http://www.w3id.org/biocompute/1.3.0/schemas/usability_domain.json",
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"type": "array",
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"title": "Usability Domain",
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"description": "Author-defined usability domain of the BCO. This field is to aid in search-ability and provide a specific description of the function of the object. It is recommended that a novel use of the BCO could result in the creation of a new entry with a new usability domain",

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