Update godmd to 1.7

Author: RubenChM

.github/env.yaml

@@ -5,5 +5,5 @@ channels:
   - anaconda
 dependencies:
   - biobb_common ==5.1.0
-  - godmd ==1.6
+  - godmd ==1.7
   - emboss

biobb_godmd/godmd/godmd_prep.py

@@ -313,10 +313,7 @@ def launch(self):
         # Copy files to host
         self.copy_to_host()
 
-        # remove temporary folder(s)
-        # self.tmp_files.extend([
-        #     self.stage_io_dict.get("unique_dir", "")
-        # ])
+        # Remove temporary folder(s)
         self.remove_tmp_files()
 
         self.check_arguments(output_files_created=True, raise_exception=False)
@@ -336,7 +333,8 @@ def godmd_prep(input_pdb_orig_path: str, input_pdb_target_path: str,
                      output_aln_target_path=output_aln_target_path,
                      properties=properties).launch()
 
-    godmd_prep.__doc__ = GOdMDPrep.__doc__
+
+godmd_prep.__doc__ = GOdMDPrep.__doc__
 
 
 def main():

biobb_godmd/godmd/godmd_run.py

@@ -289,10 +289,7 @@ def launch(self):
         # Copy files to host
         self.copy_to_host()
 
-        # remove temporary folder(s)
-        # self.tmp_files.extend([
-        #     self.stage_io_dict.get("unique_dir", ""),
-        #  ])
+        # Remove temporary folder(s)
         self.remove_tmp_files()
 
         self.check_arguments(output_files_created=True, raise_exception=False)
@@ -329,7 +326,8 @@ def godmd_run(
         properties=properties,
     ).launch()
 
-    godmd_run.__doc__ = GOdMDRun.__doc__
+
+godmd_run.__doc__ = GOdMDRun.__doc__
 
 
 def main():

biobb_godmd/json_schemas/biobb_godmd.json

@@ -33,7 +33,7 @@
     "dep_conda": [
         "python >=3.9",
         "biobb_common ==5.1.0",
-        "godmd ==1.6",
+        "godmd ==1.7",
         "emboss"
     ],
     "keywords": [