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| 1 | +### 0.9.4 (not yet released) |
| 2 | + |
| 3 | +- Replace `conda activate <env name>` with `conda run -n <env name> python --version` when checking if a conda environment exists |
| 4 | + (This is closer to the actual `conda run` command we need and avoids requests by conda to rerun `conda init` (in CI).) |
| 5 | + |
| 6 | +### 0.9.3 |
| 7 | + |
| 8 | +- bump bioimageio.spec library version to 0.5.5.5 |
| 9 | +- more robust test model reporting |
| 10 | +- improved user input axis intepretation |
| 11 | +- fixed conda subprocess calls |
| 12 | + |
| 13 | +### 0.9.2 |
| 14 | + |
| 15 | +- fix model inference tolerance reporting |
| 16 | + |
| 17 | +### 0.9.1 |
| 18 | + |
| 19 | +- fixes: |
| 20 | + - CLI |
| 21 | + - improved handling of summary argument to not create a path with brackets when given a list of paths. |
| 22 | + - improved backward compatibility when runnig tests for models specifying an older bioimageio.core version in their environment. |
| 23 | + This is relevant when using `runtime_env="as-described"`. |
| 24 | + It works by simply trying option `--summary` (new option name) and `--summary-path` (outdated option name) |
| 25 | + |
| 26 | +### 0.9.0 |
| 27 | + |
| 28 | +- update to [bioimageio.spec 0.5.4.3](https://github.com/bioimage-io/spec-bioimage-io/blob/main/changelog.md#bioimageiospec-0543) |
| 29 | + |
| 30 | +### 0.8.0 |
| 31 | + |
| 32 | +- breaking: removed `decimals` argument from bioimageio CLI and `bioimageio.core.commands.test()` |
| 33 | +- New feature: `bioimageio.core.test_description` accepts **runtime_env** and **run_command** to test a resource |
| 34 | + using the conda environment described by that resource (or another specified conda env) |
| 35 | +- new CLI command: `bioimageio add-weights` (and utility function: bioimageio.core.add_weights) |
| 36 | +- removed `bioimageio.core.proc_ops.get_proc_class` in favor of `bioimageio.core.proc_ops.get_proc` |
| 37 | +- new CLI command: `bioimageio update-format` |
| 38 | +- new CLI command: `bioimageio update-hashes` |
| 39 | + |
| 40 | +### 0.7.0 |
| 41 | + |
| 42 | +- breaking: |
| 43 | + - bioimageio CLI now has implicit boolean flags |
| 44 | +- non-breaking: |
| 45 | + - use new `ValidationDetail.recommended_env` in `ValidationSummary` |
| 46 | + - improve `get_io_sample_block_metas()` |
| 47 | + - now works for sufficiently large, but not exactly shaped inputs |
| 48 | + - update to support `zipfile.ZipFile` object with bioimageio.spec==0.5.3.5 |
| 49 | + - add io helpers `resolve` and `resolve_and_extract` |
| 50 | + - added `enable_determinism` function and **determinism** input argument for testing with seeded |
| 51 | + random generators and optionally (determinsim=="full") instructing DL frameworks to use |
| 52 | + deterministic algorithms. |
| 53 | + |
| 54 | +### 0.6.10 |
| 55 | + |
| 56 | +- fix #423 |
| 57 | + |
| 58 | +### 0.6.9 |
| 59 | + |
| 60 | +- improve bioimageio command line interface (details in #157) |
| 61 | + - add `predict` command |
| 62 | + - package command input `path` is now required |
| 63 | + |
| 64 | +### 0.6.8 |
| 65 | + |
| 66 | +- testing model inference will now check all weight formats |
| 67 | + (previously only the first one for which model adapter creation succeeded had been checked) |
| 68 | +- fix predict with blocking (Thanks @thodkatz) |
| 69 | + |
| 70 | +### 0.6.7 |
| 71 | + |
| 72 | +- `predict()` argument `inputs` may be sample |
| 73 | + |
| 74 | +### 0.6.6 |
| 75 | + |
| 76 | +- add aliases to match previous API more closely |
| 77 | + |
| 78 | +### 0.6.5 |
| 79 | + |
| 80 | +- improve adapter error messages |
| 81 | + |
| 82 | +### 0.6.4 |
| 83 | + |
| 84 | +- add `bioimageio validate-format` command |
| 85 | +- improve error messages and display of command results |
| 86 | + |
| 87 | +### 0.6.3 |
| 88 | + |
| 89 | +- Fix [#386](https://github.com/bioimage-io/core-bioimage-io-python/issues/386) |
| 90 | +- (in model inference testing) stop assuming model inputs are tileable |
| 91 | + |
| 92 | +### 0.6.2 |
| 93 | + |
| 94 | +- Fix [#384](https://github.com/bioimage-io/core-bioimage-io-python/issues/384) |
| 95 | + |
| 96 | +### 0.6.1 |
| 97 | + |
| 98 | +- Fix [#378](https://github.com/bioimage-io/core-bioimage-io-python/pull/378) (with [#379](https://github.com/bioimage-io/core-bioimage-io-python/pull/379))* |
| 99 | + |
| 100 | +### 0.6.0 |
| 101 | + |
| 102 | +- add compatibility with new bioimageio.spec 0.5 (0.5.2post1) |
| 103 | +- improve interfaces |
| 104 | + |
| 105 | +### 0.5.10 |
| 106 | + |
| 107 | +- [Fix critical bug in predict with tiling](https://github.com/bioimage-io/core-bioimage-io-python/pull/359) |
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