use long options instead

Author: FynnBe

.github/workflows/build.yaml

@@ -163,7 +163,7 @@ jobs:
         key: ${{needs.populate-cache.outputs.cache-key}}
         fail-on-cache-miss: true
     - name: pytest
-      run: pytest --disable-pytest-warnings --cov=bioimageio --cov-report=xml --cov-append --capture=no --failed-first --doctest-modules --ignore=bioimageio/core/backends --ignore=bioimageio/core/weight_converters
+      run: pytest --disable-pytest-warnings
       env:
         BIOIMAGEIO_CACHE_PATH: bioimageio_cache
         RUN_EXPENSIVE_TESTS: ${{ matrix.run-expensive-tests && 'true' || 'false' }}

pyproject.toml

@@ -40,8 +40,7 @@ typeCheckingMode = "strict"
 useLibraryCodeForTypes = true
 
 [tool.pytest.ini_options]
-addopts = "--cov=bioimageio --cov-report=xml --cov-append --capture=no --doctest-modules --failed-first --ignore=dogfood --ignore=bioimageio/core/backends --ignore=bioimageio/core/weight_converters"
-# FIXME: addopts is somehow not respected in the build.yaml workflow, so these opts are copied there!
+addopts = "--cov bioimageio --cov-report xml --cov-append --capture no --doctest-modules --failed-first --ignore dogfood --ignore bioimageio/core/backends --ignore bioimageio/core/weight_converters"
 testpaths = ["bioimageio/core", "tests"]
 
 [tool.ruff]