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Issue
Currently bioio-czi cannot be installed on Python 3.13.
$ python --version
Python 3.13.2
$ pip install bioio-czi
[truncated]
error: command '/usr/bin/gcc' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for lxml
Failed to build aicspylibczi lxml
[notice] A new release of pip is available: 24.3.1 -> 25.0.1
[notice] To update, run: pip install --upgrade pip
ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (aicspylibczi, lxml)Cause
I believe lxml < 5 does not support python 3.13. I was able to install from source by removing the upper bound. I think the lxml upper bound may be in order to guarantee support for python 3.9, but I think recent developments in bioio-base mean that bioio is ending support for python 3.9.
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