Tutorial info not correct?

[hukai916]

Hi there,

I tried to follow the tutorial here: https://biosails.github.io/pheniqs/illumina_vignette

The following snippet won't pass the config validation:

"undetermined": {
        "output": [
            "H7LT2DSXX_l01_undetermined_s01.fastq.gz",
            "H7LT2DSXX_l01_undetermined_s02.fastq.gz"
        ]
    }

The config validator complains that there is no "barcode". So, for "undetermined", how to specify the "barcode" for them?

Thanks,

[moonwatcher]

Hi, sorry for only noticing this now. Could you please post the full config and the error you are getting?

L.