[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

barcodebert/bzsl/models/dnabert/tokenization_dna.py

@@ -14,7 +14,6 @@
 # limitations under the License.
 """Tokenization classes."""
 
-
 import collections
 import logging
 import os

barcodebert/bzsl/models/dnabert/tokenization_utils.py

@@ -14,7 +14,6 @@
 # limitations under the License.
 """Tokenization classes for OpenAI GPT."""
 
-
 import copy
 import itertools
 import json

baselines/embedders.py

@@ -125,10 +125,8 @@ def load_model(self, model_path: str = "../../external-models/DNABERT/", kmer: i
         # check if path exists
 
         if not os.path.exists(dnabert_path):
-            print(
-                f"Path {dnabert_path} does not exists, check if the wrong path was given. \
-                  If not download from https://github.com/jerryji1993/DNABERT"
-            )
+            print(f"Path {dnabert_path} does not exists, check if the wrong path was given. \
+                  If not download from https://github.com/jerryji1993/DNABERT")
 
         config = BertConfig.from_pretrained(dnabert_path)
         self.tokenizer = BertTokenizer.from_pretrained(dnabert_path)

scripts/DNABERT/dnabert/tokenization_dna.py

@@ -14,7 +14,6 @@
 # limitations under the License.
 """Tokenization classes."""
 
-
 import collections
 import logging
 import os

scripts/DNABERT/dnabert/tokenization_utils.py

@@ -14,7 +14,6 @@
 # limitations under the License.
 """Tokenization classes for OpenAI GPT."""
 
-
 import copy
 import itertools
 import json