Cleanup

Author: CodeByDrescher

src/simple_process_bigraph_runtime/generation/composite_generator.py

@@ -28,15 +28,17 @@ def process_composite(model: Model, assembler: Vivarium):
             full, section, _, index = match_obj.groups()
             if section != "processDefs":
                 raise ValueError(f"Unexpected section `{section}` for reference `{process.process_def.ref_text}` ({full})`")
-            # create config
-            config = {}
-            # for param in process.config:
-            #     pass
+
             # Identify ports needing to be bound
             process_def_actual: ProcessDef = model.processDefs[int(index)]
             input_bindings: dict[str, list[str]] = {elem.ref_text : [] for elem in process_def_actual.inputs}
             output_bindings: dict[str, list[str]] = {elem.ref_text : [] for elem in process_def_actual.outputs}
 
+            # create config
+            # config = {}
+            # for param in process_def_actual.params:
+            #     config[param.name] = param.default.val if param.default is not None else determine_builtin_default(param.type.ref_text)
+
             # store validation
             store_ref: Reference
             for store_ref in process.stores:
@@ -64,7 +66,7 @@ def process_composite(model: Model, assembler: Vivarium):
             assembler.add_process(
                 name=process.name,
                 process_id=".".join(process_def_actual.python_path.path),
-                #config={???},
+                # config=config,
                 inputs=input_bindings,
                 outputs=output_bindings,
             )

src/simple_process_bigraph_runtime/main.py

@@ -49,6 +49,7 @@ def execute(duration: float, pblang_path: Annotated[str, typer.Argument(help="Pa
     pb_composite, _0, _1 = performConversion(ast_model)
 
     pb_composite.run(duration)
+    print("Execution complete")
 
 @app.command()
 def playground():

src/simple_process_bigraph_runtime/registry/toy_library.py

@@ -70,8 +70,9 @@ def inputs(self):
         }
 
     def update(self, state, interval):
+        value = str(state["result"])
         with open(os.path.expanduser("~/Documents/pb_output_dir/output_value.txt"), "w+") as f:
-            f.write(str(state["result"]))
+            f.write(value)
 
 class AddComplexNumbers(Step):
     def inputs(self):

tests/fixtures/abc.pblang

@@ -8,8 +8,8 @@ process_def add_nums path toy.AddFloatsRepeatedly
     inputs left_hand_addend right_hand_addend
     outputs result
 
-process_def print_result path toy.SaveFloatToFileRepeatedly
-    //param output_file_path: string default "~/result.txt"
+process_def print_result path toy.SaveFloatToFile
+    //param output_file_path: string default "~/abc_result.txt"
     var result: float
     inputs result