🐛 specify script relative to the workflow repo

Author: enryH

nextflow.config

@@ -11,7 +11,7 @@ params {
 
     // TODO nf-core: Specify your pipeline's command line flags
     // Input options for Acore:
-    nb                         = 'assets/2_data_analysis.ipynb'
+    nb                         = "${projectDir}/assets/2_data_analysis.ipynb" 
     input_csv                  = null
     // Vuegen:
     input_type                 = 'directory' // directory, csv, tsv, txt, json