Replace pre-commit with prek

Replace the pre-commit hook manager with prek, a faster Rust-based
alternative that's fully compatible with existing pre-commit configurations.

Changes:
- Updated pyproject.toml to use prek instead of pre-commit
- Renamed pixi tasks from pre-commit/pre-commit-update to prek/prek-update
- Updated GitHub Actions workflow to use j178/prek-action@v1
- Renamed workflow file from pre-commit.yaml to prek.yaml
- Updated documentation in README.md and .claude/README.md
- Updated SessionStart hook to install prek hooks
- Updated dependabot.yml to track prek instead of pre-commit

The .pre-commit-config.yaml file remains unchanged as prek uses the
same configuration format.

Author: claude

.claude/README.md

@@ -8,7 +8,7 @@ The `hooks/SessionStart` script automatically runs when a new Claude Code sessio
 
 1. **Installs pixi** (if not already installed) - The package and environment manager
 2. **Installs project dependencies** - All Python packages and tools defined in `pyproject.toml`
-3. **Sets up pre-commit hooks** - For automatic code quality checks
+3. **Sets up prek hooks** - For automatic code quality checks
 4. **Configures git** - Sets up merge drivers for lockfiles
 
 ## Usage with Claude Code Online
@@ -29,9 +29,9 @@ Once setup is complete, Claude can use these pixi tasks:
 - `pixi run ci` - Run full CI pipeline (format, lint, test, coverage)
 - `pixi run fix` - Auto-fix common issues (update lock, format, lint)
 
-#### Pre-commit
-- `pixi run pre-commit` - Run all pre-commit hooks
-- `pixi run pre-commit-update` - Update pre-commit hook versions
+#### Prek Hooks
+- `pixi run prek` - Run all prek hooks
+- `pixi run prek-update` - Update prek hook versions
 
 ### How It Works
 
@@ -45,7 +45,7 @@ If you encounter issues:
 
 1. **Dependencies not found**: Run `pixi install` manually
 2. **Lockfile conflicts**: Run `pixi run update-lock`
-3. **Pre-commit issues**: Run `pixi run pre-commit-update`
+3. **Prek issues**: Run `pixi run prek-update`
 4. **Full reset**: Delete `.pixi` directory and restart session
 
 ### Customization

.claude/hooks/SessionStart

@@ -29,9 +29,9 @@ export PATH="$HOME/.pixi/bin:$PATH"
 echo "📦 Installing project dependencies..."
 pixi install
 
-# Run pre-commit installation
-echo "🔧 Setting up pre-commit hooks..."
-pixi run pre-commit install || echo "⚠️  Pre-commit installation skipped (optional)"
+# Run prek installation
+echo "🔧 Setting up prek hooks..."
+pixi run prek install || echo "⚠️  Prek installation skipped (optional)"
 
 # Set up git merge driver for lockfiles
 echo "🔧 Configuring git merge driver..."

.github/dependabot.yml

@@ -14,7 +14,7 @@ updates:
         #try to group all development dependencies updates into a single pr
         patterns:
           - "check-manifest"
-          - "pre-commit"
+          - "prek"
           - "pylint"
           - "pytest"
           - "pytest-cov"

.github/workflows/pre-commit.yaml .github/workflows/prek.yaml.github/workflows/pre-commit.yaml renamed to .github/workflows/prek.yaml

@@ -1,10 +1,10 @@
-name: pre-commit
+name: prek
 
 on: [pull_request]
 
 jobs:
-  pre-commit:
+  prek:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v6
-      - uses: pre-commit/action@v3.0.1
+      - uses: j178/prek-action@v1

README.md

@@ -42,7 +42,7 @@ This template includes built-in support for [Claude Code](https://docs.claude.co
 
 - Installs pixi package manager
 - Sets up all project dependencies
-- Configures pre-commit hooks
+- Configures prek hooks
 - Prepares the development environment
 
 **Quick Start with Claude Code:**

pyproject.toml

@@ -41,7 +41,7 @@ test = [
   "hypothesis>=6.104.2,<=6.150.2",
   "ruff>=0.5.0,<=0.14.11",
   "coverage>=7.5.4,<=7.13.1",
-  "pre-commit<=4.5.1",
+  "prek>=0.13.0",
   "ty>=0.0.8,<=0.0.8",
 ]
 
@@ -66,8 +66,8 @@ dev = { cmd = "devpod up . --ide none && ssh pythontemplate.devpod", depends-on
 dev-vs = { cmd = "devpod up . --ide vscode", depends-on = ["dev-add-docker"] }
 dev-restart = { cmd = "devpod up . --recreate --ide none && ssh pythontemplate.devpod", depends-on = ["dev-add-docker"] }
 dev-restart-vs = { cmd = "devpod up . --recreate --ide vscode", depends-on = ["dev-add-docker"] }
-pre-commit = "pre-commit run -a"
-pre-commit-update = "pre-commit autoupdate"
+prek = "prek run -a"
+prek-update = "prek autoupdate"
 format = "ruff format ."
 check-clean-workspace = "git diff --exit-code"
 ruff-lint = "ruff check . --fix"
@@ -82,7 +82,7 @@ coverage-report = "coverage report -m"
 update-lock = "pixi update && git commit -a -m'update pixi.lock' || true"
 push = "git push"
 update-lock-push = { depends-on = ["update-lock", "push"] }
-fix = { depends-on = ["update-lock", "format", "ruff-lint", "pre-commit"] }
+fix = { depends-on = ["update-lock", "format", "ruff-lint", "prek"] }
 fix-commit-push = { depends-on = ["fix", "commit-format", "update-lock-push"] }
 ci-no-cover = { depends-on = ["style", "test"] }
 ci = { depends-on = [