here we go

Author: cboettig

.github/workflows/docker-rstudio.yml

@@ -1,42 +1,2 @@
-FROM quay.io/jupyter/minimal-notebook:ubuntu-24.04
-
-# Make code-server extensions etc persist to container, not hub
-ENV XDG_DATA_HOME=/opt/share
-
-# Python environment
-COPY jupyter-ai.yml environment.yml
-RUN conda update -n base -c conda-forge conda && \
-    conda env update --file environment.yml
-
-USER root
-
-# code-server (VSCode)
-RUN curl -fsSL https://code-server.dev/install.sh | sh && rm -rf .cache 
-
-COPY install-utilities.sh install-utilities.sh
-RUN bash install-utilities.sh && rm install-utilities.sh
-
-# R & RStudio
-RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_r.sh | bash
-RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_rstudio.sh | bash
-
-## Add rstudio's binaries to path for quarto
-ENV PATH=$PATH:/usr/lib/rstudio-server/bin/quarto/bin
-
-# When run as root, install.r automagically handles any necessary apt-gets
-COPY install.r install.r
-RUN Rscript install.r
-## switch from BSPM to r-universe for user default, only after BSPM does install.r! 
-COPY Rprofile /usr/lib/R/etc/Rprofile.site
-
-USER ${NB_USER}
-
-RUN echo "ms-python.python ms-toolsai.jupyter quarto.quarto continue.continue ms-vscode.live-server posit.shiny reditorsupport.r alefragnani.project-manager" | xargs -n 1 code-server --install-extension
-
-COPY spatial-env.yml spatial-env.yml
-RUN conda update -n base -c conda-forge conda && \
-    conda env update --file spatial-env.yml
-# GDAL env var for vsi
-ENV CPL_VSIL_USE_TEMP_FILE_FOR_RANDOM_WRITE=YES
-
+FROM ghcr.io/rocker-org/ml-spatial
 

images/Dockerfile

@@ -1,45 +1,7 @@
-FROM quay.io/jupyter/pytorch-notebook:cuda12-ubuntu-24.04
-
-# Make code-server extensions etc persist to container, not hub
-ENV XDG_DATA_HOME=/opt/share
-
-COPY jupyter-ai.yml environment.yml
-RUN conda update --all --solver=classic -n base -c conda-forge conda && \
-    conda env update --file environment.yml
-
-USER root
-
-# code-server (VSCode)
-RUN curl -fsSL https://code-server.dev/install.sh | sh && rm -rf .cache 
-
-COPY install-utilities.sh install-utilities.sh
-RUN bash install-utilities.sh && rm install-utilities.sh
-
-RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_r.sh | bash
-RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_rstudio.sh | bash
-## Add rstudio's binaries to path for quarto
-ENV PATH=$PATH:/usr/lib/rstudio-server/bin/quarto/bin
-
-
-# When run as root, install.r automagically handles any necessary apt-gets
-COPY install.r install.r
-RUN Rscript install.r
-
-## switch from BSPM to r-universe for user default 
-COPY Rprofile /usr/lib/R/etc/Rprofile.site
-
-USER ${NB_USER}
-
-RUN echo "ms-python.python ms-toolsai.jupyter quarto.quarto continue.continue ms-vscode.live-server posit.shiny reditorsupport.r alefragnani.project-manager" | xargs -n 1 code-server --install-extension
-
-COPY spatial-env.yml spatial-env.yml
-RUN conda update -n base -c conda-forge conda && \
-    conda env update --file spatial-env.yml
+FROM ghcr.io/rocker-org/cuda-spatial 
 
 COPY rl-env.yml rl-env.yml
 RUN conda update -n base -c conda-forge conda && \
     conda env update --file rl-env.yml
 
-# GDAL env var for vsi
-ENV CPL_VSIL_USE_TEMP_FILE_FOR_RANDOM_WRITE=YES