Fixed some permissions in components

Author: cmacmackin

src/braginskii_friction.cxx

@@ -13,8 +13,8 @@ BraginskiiFriction::BraginskiiFriction(std::string name, Options& alloptions, So
                  readIfSet("species:{all_species}:velocity", Regions::Interior),
                  readOnly("species:{all_species}:AA"),
                  readIfSet("species:{all_species}:charge"),
-                 readOnly("species:{all_species}:collision_frequencies:{all_species}_{"
-                          "all_species2}_coll"),
+                 readIfSet("species:{all_species}:collision_frequencies:{all_species}_{"
+                           "all_species2}_coll"),
                  readWrite("species:{all_species}:momentum_source")}) {
   AUTO_TRACE();
   Options& options = alloptions[name];

src/braginskii_ion_viscosity.cxx

@@ -19,7 +19,6 @@ BraginskiiIonViscosity::BraginskiiIonViscosity(std::string name, Options& allopt
         readIfSet("species:{non_electrons}:velocity"),
         readIfSet("species:{non_electrons}:charge"),
         readIfSet("species:{non_electrons}:collision_frequencies:{coll_type}"),
-        readOnly("fields:phi"),
         readWrite("species:{non_electrons}:momentum_source"),
         readWrite("species:{non_electrons}:energy_source"),
         readWrite("fields:DivJextra"),
@@ -108,6 +107,9 @@ BraginskiiIonViscosity::BraginskiiIonViscosity(std::string name, Options& allopt
     coll_types.push_back("{non_electrons}_{all_species}_coll");
     coll_types.push_back("{non_electrons}_{all_species}_cx");
   }
+  if (perpendicular) {
+    state_variable_access.setAccess(readOnly("fields:phi"));
+  }
   state_variable_access.substitute("coll_type", coll_types);
 }
 

src/vorticity.cxx

@@ -225,7 +225,9 @@ Vorticity::Vorticity(std::string name, Options& alloptions, Solver* solver)
   if (phi_boundary_relax) {
     state_variable_access.setAccess(readOnly("time"));
   } else {
-    state_variable_access.setAccess(readOnly("species:e:AA"));
+    if (sheath_boundary) {
+      state_variable_access.setAccess(readOnly("species:e:AA"));
+    }
     state_variable_access.setAccess(
         readIfSet("species:e:temperature", Regions::Interior));
   }