view function now shows SWC metadata in detailed view after upload

Author: Luke Tuite

ingest/templates/ingest/new_metadata_detail.html

@@ -8,5 +8,6 @@ <h1>Detail of New Metadata</h1>
 {% include 'ingest/dataset_detail.html' %}
 {% include 'ingest/specimen_detail.html' %}
 {% include 'ingest/image_detail.html' %}
+{% include 'ingest/swc_detail.html' %}
 {% endblock %}
 

ingest/templates/ingest/swc_detail.html

@@ -0,0 +1,50 @@
+{% if swcs %}		
+<h3>SWC</h3>
+
+  <table class="table">    								
+    <thead>
+    <tr>
+    <th>tracingFile</th>
+    <th>sourceData</th>
+    <th>sourceDataSample</th>
+    <th>sourceDataSubmission</th>
+    <th>coordinates</th>
+    <th>coordinatesRegistration</th>
+    <th>brainRegion</th>
+    <th>brainRegionAtlas</th>
+    <th>brainRegionAtlasName</th>
+    <th>brainRegionAxonalProjection</th>
+    <th>brainRegionDendriticProjection</th>
+    <th>neuronType</th>
+    <th>segmentTags</th>
+    <th>proofreadingLevel</th>
+    <th>notes</th>
+    </tr>
+    </thead>
+    <tbody>
+    {% for s in swcs %}
+    <tr>
+    <td>{{ s.tracingFile }}</td>
+    <td>{{ s.sourceData }}</td>
+    <td>{{ s.sourceDataSample }}</td>
+    <td>{{ s.sourceDataSubmission }}</td>
+    <td>{{ s.coordinates }}</td>
+    <td>{{ s.coordinatesRegistration }}</td>
+    <td>{{ s.brainRegion }}</td>
+    <td>{{ s.brainRegionAtlas }}</td>
+    <td>{{ s.brainRegionAtlasName }}</td>
+    <td>{{ s.brainRegionAxonalProjection }}</td>
+    <td>{{ s.brainRegionDendriticProjection }}</td>
+    <td>{{ s.neuronType }}</td>
+    <td>{{ s.segmentTags }}</td>
+    <td>{{ s.proofreadingLevel }}</td>
+    <td>{{ s.notes }}</td>
+    </tr>
+    {% endfor %}
+  </table>
+  
+{% else %}
+  <div class="alert alert-info">
+    <p>There is not SWC data associated with this dataset. Please contact BIL Support if this is incorrect.</p>
+  </div>
+{% endif %}

ingest/views.py

@@ -462,8 +462,9 @@ def new_metadata_detail(request, pk):
     datasets = Dataset.objects.filter(sheet_id=pk).all()
     specimens = Specimen.objects.filter(sheet_id=pk).all()
     images = Image.objects.filter(sheet_id=pk).all()
+    swcs = SWC.objects.filter(sheet_id=pk).all()
 
-    return render(request, 'ingest/new_metadata_detail.html', {'contributors':contributors, 'funders':funders, 'publications':publications, 'instruments':instruments, 'datasets':datasets, 'specimens':specimens, 'images':images})
+    return render(request, 'ingest/new_metadata_detail.html', {'contributors':contributors, 'funders':funders, 'publications':publications, 'instruments':instruments, 'datasets':datasets, 'specimens':specimens, 'images':images, 'swcs':swcs})
 
 class DescriptiveMetadataDetail(LoginRequiredMixin, DetailView):
     """ A detailed view of a single piece of metadata. """