@@ -71,12 +71,18 @@ def __get_cnbtaxonomy(df):
7171 return df ["cnbtaxonomy" ].value_counts ().to_dict ()
7272
7373
74- def __get_samplelocalid (df ):
75- return df ["samplelocalid" ].value_counts ().to_dict ()
74+ def __get_genotypes (df ):
75+ """
76+ Write documentation here.
77+ """
78+ return df ["genotype" ].unique ()
7679
7780
78- def __get_genotype (df ):
79- return df ["genotype" ].value_counts ().to_dict ()
81+ def __get_genotype_frequency (df ):
82+ """
83+ Write documentation here.
84+ """
85+ return df ["genotypes" ].value_counts ().to_dict ()
8086
8187
8288def __get_generalmodality (df ):
@@ -98,16 +104,6 @@ def __get_contributors(df):
98104 return df ["contributorname" ].unique ()
99105
100106
101- def __get_project_names (df ):
102- """
103- Gets the unique list of project names.
104-
105- Input: dataframe
106- Output: list
107- """
108- return df ["project" ].unique ()
109-
110-
111107def __get_list_of_projects (df ):
112108 """
113109 Get the list of names for unique projects
@@ -139,12 +135,6 @@ def report():
139135
140136 df = today ()
141137
142- def __get_genotype_frequency (df ):
143- """
144- Write documentation here.
145- """
146- return df ["genotypes" ].value_counts ().to_dict ()
147-
148138 report = {}
149139 report ["date" ] = tdate
150140 report ["number_of_datasets" ] = __get_number_of_datasets (df )
0 commit comments