[doc] update docs

Author: chaoming0625

docs/apis/brainpy.dyn.synapses.rst

@@ -5,6 +5,12 @@ Synaptic Dynamics
 .. automodule:: brainpy.dyn
 
 
+
+
+Phenomenological synapse models
+-------------------------------
+
+
 .. autosummary::
    :toctree: generated/
    :nosignatures:
@@ -18,8 +24,33 @@ Synaptic Dynamics
    NMDA
    STD
    STP
+
+
+
+Biological synapse models
+-------------------------
+
+.. autosummary::
+   :toctree: generated/
+   :nosignatures:
+   :template: classtemplate.rst
+
    AMPA
    GABAa
    BioNMDA
+
+
+
+Gap junction models
+-------------------
+
+
+.. autosummary::
+   :toctree: generated/
+   :nosignatures:
+   :template: classtemplate.rst
+
    DiffusiveCoupling
-   AdditiveCoupling
+   AdditiveCoupling
+
+

docs/tutorial_building/customize_neuron_models.ipynb

@@ -114,7 +114,7 @@
    "id": "3095ec6f",
    "metadata": {},
    "source": [
-    "## [Hodgkin–Huxley Model](https://brainmodels.readthedocs.io/en/latest/apis/generated/brainmodels.neurons.HH.html)"
+    "## [Hodgkin–Huxley Model](https://brainpy.readthedocs.io/en/latest/apis/generated/brainpy.dyn.HH.html)"
    ]
   },
   {
@@ -268,7 +268,7 @@
    "id": "04d7d580",
    "metadata": {},
    "source": [
-    "## [Leaky Integrate-and-Fire Model](https://brainmodels.readthedocs.io/en/latest/apis/generated/brainmodels.neurons.LIF.html)"
+    "## [Leaky Integrate-and-Fire Model](https://brainpy.readthedocs.io/en/latest/apis/generated/brainpy.dyn.Lif.html)"
    ]
   },
   {

docs/tutorial_building/kinetic_synapse_models.ipynb

@@ -5,7 +5,7 @@
    "id": "4d9f49ab",
    "metadata": {},
    "source": [
-    "# kinetic Synaptic Models"
+    "# Kinetic Synaptic Models"
    ]
   },
   {

docs/tutorial_building/phenon_synapse_models.ipynb

@@ -306,8 +306,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model excitatory synapse using Exponential + COBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet(E=0.))"
    ]
   },
@@ -347,8 +345,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model excitatory synapse using Exponential + COBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet(E=-80.))"
    ],
    "metadata": {
@@ -480,8 +476,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model excitatory synapse using Exponential + CUBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet2(g_max=5.))"
    ],
    "metadata": {
@@ -529,8 +523,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model inhibitory synapse using Exponential + CUBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet2(g_max=-5.))"
    ],
    "metadata": {
@@ -822,8 +814,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model excitatory synapse using Dual Exponential + COBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet4(E=0.))"
    ],
    "metadata": {
@@ -871,8 +861,6 @@
     }
    ],
    "source": [
-    "# TODO: how to model excitatory synapse using Dual Exponential + COBA synapse model?\n",
-    "\n",
     "run_a_net(SimpleNet4(E=-80.))"
    ],
    "metadata": {