settings.json

{
  "permissions": {
    "allow": [
      "Bash(cat:*)",
      "Bash(ls:*)",
      "Bash(head:*)",
      "Bash(tail:*)",
      "Bash(wc:*)",
      "Bash(grep:*)",
      "Bash(find:*)",
      "Bash(sed:*)",
      "Bash(awk:*)",
      "Bash(sort:*)",
      "Bash(uniq:*)",
      "Bash(mkdir:*)",
      "Bash(cp:*)",
      "Bash(mv:*)",
      "Bash(rm:*.pyc)",
      "Bash(rm:*__pycache__*)",
      "Bash(python:scripts/*)",
      "Bash(python:-c *)",
      "Bash(python:-m pytest*)",
      "Bash(python:-m http.server*)",
      "Bash(pip:install *)",
      "Bash(pip:list*)",
      "Bash(git:status*)",
      "Bash(git:diff*)",
      "Bash(git:add *)",
      "Bash(git:commit *)",
      "Bash(git:log*)",
      "Bash(git:branch*)",
      "Bash(npm:run *)",
      "Bash(npm:install*)",
      "Bash(echo:*)",
      "Bash(touch:*)",
      "Bash(chmod:*)",
      "Read(*)",
      "Write(paper/*)",
      "Write(scripts/*)",
      "Write(data/*)",
      "Write(docs/*)",
      "Write(.claude/*)",
      "Write(README.md)",
      "Write(*.py)",
      "Write(*.md)",
      "Write(*.json)",
      "Write(*.html)",
      "Write(*.css)",
      "Write(*.js)"
    ],
    "deny": [
      "Bash(rm:-rf *)",
      "Bash(sudo:*)",
      "Bash(chmod:777 *)",
      "Write(/etc/*)",
      "Write(/usr/*)",
      "Write(~/.ssh/*)"
    ]
  },
  "preferences": {
    "autoAcceptEdits": true,
    "compactMode": false,
    "verboseToolCalls": false,
    "maxTurnsWithoutConfirmation": 25
  },
  "context": {
    "alwaysInclude": [
      ".claude/CLAUDE.md"
    ],
    "ignorePatterns": [
      "node_modules/**",
      "__pycache__/**",
      "*.pyc",
      ".git/**",
      "data/processed/**"
    ]
  },
  "project": {
    "name": "Cricket Anthropometric Research",
    "type": "research-paper",
    "primaryLanguage": "python",
    "secondaryLanguages": ["markdown", "html", "javascript"],
    "outputFormats": ["markdown", "pdf", "github-pages"]
  }
}