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sbabyanushasbabyanusha
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Merge pull request #2240 from cBioPortal/public_study
ilc_msk_2023: update for public release
2 parents 5fe767d + 3b82e82 commit 5a13d7e

13 files changed

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-21
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‎public/ilc_msk_2023/case_lists/cases_all.txt‎

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case_list_name: All samples
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case_list_description: All samples (25 samples)
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case_list_category: all_cases_in_study
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case_list_ids: CDW1 CDW2 CDW3 CDW4 CDW5 CDW6 CDW7 CDW8 CDW10 CDW11 CDW12 CDW13 CDW16 CDW17 CDW18 CDW19 CDW20 CDW29 CDW21 CDW22 CDW30 CDW23 CDW24 CDW25 CDW28
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case_list_ids: P-0056185-T02-IM6 P-0026615-T01-IM6 P-0004023-T01-IM3 P-0005526-T01-IM5 P-0000820-T02-IM3 P-0009325-T02-IM5 P-0010869-T01-IM5 P-0031517-T01-IM6 P-0034517-T01-IM6 P-0014406-T01-IM6 P-0011400-T01-IM5 P-0003591-T01-IM5 P-0007759-T01-IM5 P-0026113-T01-IM6 P-0034891-T01-IM6 P-0019191-T01-IM6 P-0019864-T01-IM6 P-0005968-T01-IM5 P-0024899-T01-IM6 P-0017113-T01-IM6 P-0024979-T01-IM6 P-0025335-T01-IM6 P-0026032-T01-IM6 P-0008952-T01-IM5 P-0004023-T02-IM5

‎public/ilc_msk_2023/case_lists/cases_cna.txt‎

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case_list_name: Samples with CNA data
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case_list_description: Samples with CNA data (25 samples)
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case_list_category: all_cases_with_cna_data
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case_list_ids: CDW1 CDW2 CDW3 CDW4 CDW5 CDW6 CDW7 CDW8 CDW10 CDW11 CDW12 CDW13 CDW16 CDW17 CDW18 CDW19 CDW20 CDW29 CDW21 CDW22 CDW30 CDW23 CDW24 CDW25 CDW28
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case_list_ids: P-0056185-T02-IM6 P-0004023-T01-IM3 P-0005526-T01-IM5 P-0000820-T02-IM3 P-0009325-T02-IM5 P-0026615-T01-IM6 P-0031517-T01-IM6 P-0034517-T01-IM6 P-0014406-T01-IM6 P-0011400-T01-IM5 P-0003591-T01-IM5 P-0007759-T01-IM5 P-0026113-T01-IM6 P-0034891-T01-IM6 P-0019191-T01-IM6 P-0019864-T01-IM6 P-0005968-T01-IM5 P-0010869-T01-IM5 P-0024899-T01-IM6 P-0017113-T01-IM6 P-0026032-T01-IM6 P-0025335-T01-IM6 P-0024979-T01-IM6 P-0008952-T01-IM5 P-0004023-T02-IM5

‎public/ilc_msk_2023/case_lists/cases_cnaseq.txt‎

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case_list_name: Samples with mutation and CNA data
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case_list_description: Samples with mutation and CNA data (25 samples)
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case_list_category: all_cases_with_mutation_and_cna_data
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case_list_ids: CDW1 CDW2 CDW3 CDW4 CDW5 CDW6 CDW7 CDW8 CDW10 CDW11 CDW12 CDW13 CDW16 CDW17 CDW18 CDW19 CDW20 CDW29 CDW21 CDW22 CDW30 CDW23 CDW24 CDW25 CDW28
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case_list_ids: P-0056185-T02-IM6 P-0004023-T01-IM3 P-0005526-T01-IM5 P-0000820-T02-IM3 P-0014406-T01-IM6 P-0011400-T01-IM5 P-0007759-T01-IM5 P-0026113-T01-IM6 P-0019191-T01-IM6 P-0019864-T01-IM6 P-0005968-T01-IM5 P-0024899-T01-IM6 P-0025335-T01-IM6 P-0026032-T01-IM6 P-0004023-T02-IM5 P-0026615-T01-IM6 P-0031517-T01-IM6 P-0010869-T01-IM5 P-0017113-T01-IM6 P-0009325-T02-IM5 P-0003591-T01-IM5 P-0034891-T01-IM6 P-0024979-T01-IM6 P-0034517-T01-IM6 P-0008952-T01-IM5

‎public/ilc_msk_2023/case_lists/cases_sequenced.txt‎

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case_list_name: Samples with mutation data
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case_list_description: Samples with mutation data (25 samples)
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case_list_category: all_cases_with_mutation_data
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case_list_ids: CDW1 CDW2 CDW3 CDW4 CDW5 CDW6 CDW7 CDW8 CDW10 CDW11 CDW12 CDW13 CDW16 CDW17 CDW18 CDW19 CDW20 CDW29 CDW21 CDW22 CDW30 CDW23 CDW24 CDW25 CDW28
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case_list_ids: P-0056185-T02-IM6 P-0004023-T01-IM3 P-0005526-T01-IM5 P-0000820-T02-IM3 P-0014406-T01-IM6 P-0011400-T01-IM5 P-0007759-T01-IM5 P-0026113-T01-IM6 P-0019191-T01-IM6 P-0019864-T01-IM6 P-0005968-T01-IM5 P-0024899-T01-IM6 P-0025335-T01-IM6 P-0026032-T01-IM6 P-0004023-T02-IM5 P-0026615-T01-IM6 P-0031517-T01-IM6 P-0010869-T01-IM5 P-0017113-T01-IM6 P-0009325-T02-IM5 P-0003591-T01-IM5 P-0034891-T01-IM6 P-0024979-T01-IM6 P-0034517-T01-IM6 P-0008952-T01-IM5

‎public/ilc_msk_2023/case_lists/cases_sv.txt‎

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case_list_name: Samples with SV data
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case_list_description: All samples with SV data (25 samples)
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case_list_category: all_cases_with_sv_data
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case_list_ids: CDW1 CDW2 CDW3 CDW4 CDW5 CDW6 CDW7 CDW8 CDW10 CDW11 CDW12 CDW13 CDW16 CDW17 CDW18 CDW19 CDW20 CDW29 CDW21 CDW22 CDW30 CDW23 CDW24 CDW25 CDW28
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case_list_ids: P-0056185-T02-IM6 P-0004023-T01-IM3 P-0005526-T01-IM5 P-0000820-T02-IM3 P-0014406-T01-IM6 P-0011400-T01-IM5 P-0007759-T01-IM5 P-0026113-T01-IM6 P-0019191-T01-IM6 P-0019864-T01-IM6 P-0005968-T01-IM5 P-0024899-T01-IM6 P-0025335-T01-IM6 P-0026032-T01-IM6 P-0004023-T02-IM5 P-0026615-T01-IM6 P-0031517-T01-IM6 P-0010869-T01-IM5 P-0017113-T01-IM6 P-0009325-T02-IM5 P-0003591-T01-IM5 P-0034891-T01-IM6 P-0024979-T01-IM6 P-0034517-T01-IM6 P-0008952-T01-IM5

‎public/ilc_msk_2023/data_clinical_patient.txt‎

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‎public/ilc_msk_2023/data_clinical_sample.txt‎

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‎public/ilc_msk_2023/data_cna.txt‎

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‎public/ilc_msk_2023/data_cna_hg19.seg‎

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‎public/ilc_msk_2023/data_gene_panel_matrix.txt‎

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