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rmadupurirmadupuri
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Add 5 public studies from iAtlas (#2248)
* initial commit * add license, fix meta
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‎public/blca_iatlas_imvigor210_2017/LICENSE‎

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The data are available under the ODC Open Database License (ODbL)(http://opendatacommons.org/licenses/odbl/1.0/) (summary available here: http://www.opendatacommons.org/licenses/odbl/1-0/summary/): you are free to share and modify the data so long as you attribute any public use of the database, or works produced from the database; keep the resulting data-sets open; and offer your shared or adapted version of the data-set under the same ODbL license.

‎public/blca_iatlas_imvigor210_2017/case_lists/cases_all.txt‎

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cancer_study_identifier: blca_iatlas_imvigor210_2017
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stable_id: blca_iatlas_imvigor210_2017_all
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case_list_name: All samples
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case_list_description: All samples (347 samples)
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case_list_category: all_cases_in_study
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case_list_ids: 10023 10043 10083 10299 10065 10285 10033 10133 10258 10177 10323 10357 10195 10216 10110 10253 10169 10251 10235 10206 10282 10207 10112 10316 10303 10084 10160 10100 10028 10240 10374 10136 10040 10175 10095 10127 10187 10182 10345 10234 10167 10270 10089 10121 10298 10225 10257 10286 10070 10149 10224 10302 10087 10346 10329 10115 10352 10293 10079 10038 10055 10097 10326 10266 10280 10006 10236 10129 10344 10365 10030 10143 10054 10051 10123 10188 10355 10217 10050 10020 10190 10304 10142 10164 10244 10166 10319 10106 10284 10098 10300 10248 10246 10368 10203 10001 10294 10057 10254 10148 10256 10013 10081 10170 10287 10059 10109 10269 10313 10232 10350 10139 10122 10226 10208 10180 10064 10181 10347 10069 10358 10273 10230 10104 10159 10367 10150 10340 10056 10022 10034 10198 10228 10131 10135 10245 10035 10191 10073 10281 10082 10373 10014 10168 10046 10309 10088 10250 10108 10200 10103 10296 10036 10099 10165 10062 10215 10174 10120 10074 10045 10264 10118 10259 10360 10213 10145 10343 10144 10173 10005 10027 10315 10086 10363 10220 10077 10107 10242 10349 10274 10178 10061 10019 10125 10372 10290 10091 10238 10341 10080 10124 10071 10011 10153 10262 10063 10066 10305 10004 10189 10361 10354 10025 10032 10140 10137 10171 10227 10072 10053 10332 10192 10272 10330 10308 10321 10128 10047 10172 10093 10291 10156 10211 10058 10243 10024 10275 10205 10292 10101 10154 10339 10134 10369 10337 10039 10255 10113 10151 10334 10277 10031 10249 10279 10328 10310 10016 10353 10085 10193 10314 10324 10348 10147 10146 10116 10370 10037 10210 10012 10184 10090 10007 10327 10359 10252 10185 10212 10021 10111 10141 10247 10017 10117 10161 10196 10271 10114 10008 10096 10199 10307 10102 10078 10194 10222 10241 10209 10155 10176 10333 10306 10052 10263 10076 10301 10268 10317 10068 10239 10371 10048 10336 10295 10289 10201 10138 10041 10042 10157 10162 10049 10132 10362 10320 10015 10105 10018 10130 10364 10221 10325 10356 10375 10366 10092 10202 10029 10010 10260 10312 10233 10060 10335 10311 10265 10297 10351 10044 10223 10026 10119 10003 10204 10229 10267

‎public/blca_iatlas_imvigor210_2017/case_lists/cases_mRNA.txt‎

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cancer_study_identifier: blca_iatlas_imvigor210_2017
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stable_id: blca_iatlas_imvigor210_2017_rna_seq_mrna
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case_list_name: Samples with mRNA data
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case_list_description: Samples with mRNA expression data (27 samples)
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case_list_category: all_cases_with_mrna_rnaseq_data
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case_list_ids: 10023 10043 10083 10299 10065 10285 10033 10133 10258 10177 10323 10357 10195 10216 10110 10253 10169 10251 10235 10206 10282 10207 10112 10316 10303 10084 10160 10100 10028 10240 10374 10136 10040 10175 10095 10127 10187 10182 10345 10234 10167 10270 10089 10121 10298 10225 10257 10286 10070 10149 10224 10302 10087 10346 10329 10115 10352 10293 10079 10038 10055 10097 10326 10266 10280 10006 10236 10129 10344 10365 10030 10143 10054 10051 10123 10188 10355 10217 10050 10020 10190 10304 10142 10164 10244 10166 10319 10106 10284 10098 10300 10248 10246 10368 10203 10001 10294 10057 10254 10148 10256 10013 10081 10170 10287 10059 10109 10269 10313 10232 10350 10139 10122 10226 10208 10180 10064 10181 10347 10069 10358 10273 10230 10104 10159 10367 10150 10340 10056 10022 10034 10198 10228 10131 10135 10245 10035 10191 10073 10281 10082 10373 10014 10168 10046 10309 10088 10250 10108 10200 10103 10296 10036 10099 10165 10062 10215 10174 10120 10074 10045 10264 10118 10259 10360 10213 10145 10343 10144 10173 10005 10027 10315 10086 10363 10220 10077 10107 10242 10349 10274 10178 10061 10019 10125 10372 10290 10091 10238 10341 10080 10124 10071 10011 10153 10262 10063 10066 10305 10004 10189 10361 10354 10025 10032 10140 10137 10171 10227 10072 10053 10332 10192 10272 10330 10308 10321 10128 10047 10172 10093 10291 10156 10211 10058 10243 10024 10275 10205 10292 10101 10154 10339 10134 10369 10337 10039 10255 10113 10151 10334 10277 10031 10249 10279 10328 10310 10016 10353 10085 10193 10314 10324 10348 10147 10146 10116 10370 10037 10210 10012 10184 10090 10007 10327 10359 10252 10185 10212 10021 10111 10141 10247 10017 10117 10161 10196 10271 10114 10008 10096 10199 10307 10102 10078 10194 10222 10241 10209 10155 10176 10333 10306 10052 10263 10076 10301 10268 10317 10068 10239 10371 10048 10336 10295 10289 10201 10138 10041 10042 10157 10162 10049 10132 10362 10320 10015 10105 10018 10130 10364 10221 10325 10356 10375 10366 10092 10202 10029 10010 10260 10312 10233 10060 10335 10311 10265 10297 10351 10044 10223 10026 10119 10003 10204 10229 10267

‎public/blca_iatlas_imvigor210_2017/case_lists/cases_sequenced.txt‎

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cancer_study_identifier: blca_iatlas_imvigor210_2017
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stable_id: blca_iatlas_imvigor210_2017_sequenced
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case_list_name: Samples with mutation data
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case_list_description: Samples with mutation data (242 samples)
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case_list_category: all_cases_with_mutation_data
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case_list_ids: 10020 10043 10190 10083 10007 10304 10359 10252 10164 10299 10065 10166 10244 10106 10284 10285 10033 10098 10185 10133 10300 10107 10242 10212 10349 10248 10178 10111 10141 10246 10061 10258 10017 10117 10161 10196 10271 10368 10019 10125 10114 10372 10290 10203 10238 10003 10080 10294 10357 10124 10057 10071 10254 10008 10096 10148 10199 10307 10195 10216 10102 10078 10153 10110 10262 10063 10013 10253 10066 10081 10305 10222 10251 10059 10241 10269 10209 10235 10232 10090 10306 10350 10052 10263 10076 10139 10122 10226 10268 10282 10354 10361 10180 10025 10207 10317 10064 10181 10140 10303 10347 10171 10227 10069 10084 10358 10239 10273 10230 10053 10371 10100 10104 10240 10048 10192 10040 10330 10336 10159 10321 10295 10367 10095 10201 10127 10187 10340 10047 10041 10042 10056 10022 10157 10162 10034 10172 10093 10198 10234 10345 10049 10132 10156 10167 10131 10135 10245 10035 10270 10015 10073 10281 10105 10082 10014 10089 10058 10243 10024 10205 10221 10101 10154 10339 10298 10369 10325 10356 10375 10046 10309 10088 10108 10286 10202 10029 10149 10224 10296 10039 10036 10255 10087 10165 10346 10062 10174 10329 10151 10334 10120 10045 10264 10277 10010 10079 10260 10038 10055 10118 10060 10233 10259 10213 10279 10145 10311 10265 10310 10335 10353 10085 10280 10351 10006 10314 10343 10144 10147 10173 10044 10129 10146 10027 10236 10116 10030 10365 10370 10223 10054 10037 10210 10026 10188 10355 10217 10012 10028 10184 10267

‎public/blca_iatlas_imvigor210_2017/data_clinical_patient.txt‎

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‎public/blca_iatlas_imvigor210_2017/data_clinical_sample.txt‎

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‎public/blca_iatlas_imvigor210_2017/data_gene_panel_matrix.txt‎

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‎public/blca_iatlas_imvigor210_2017/data_gene_signatures.txt‎

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‎public/blca_iatlas_imvigor210_2017/data_mrna_seq_tpm.txt‎

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‎public/blca_iatlas_imvigor210_2017/data_mrna_seq_tpm_zscores_ref_all_samples.txt‎

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