Running the GitRepositoryIssuesProvider LFS issues check against a sparse-checkout Git repo yields files that aren't checked out as erroneously binary non-LFS files.

Steps to reproduce:

• Clone a repository with sparse checkout such that only a single sub-directory in the repo is present on disk
• Run the Git commands GitRepositoryIssuesProvider would run
  • git lfs ls-files -n yields the binary untracked files correctly
  • git grep -Ul . and git grep -UL . yield the working files
  • git ls-files -z reports the entire working tree

Expected result:

LFS files are only reported as not tracked if they are actually not tracked

Actual result:

All files not in the current sparse checkout are reported as LFS untracked

Workaround:

None

Possible fix:

Use git ls-files -t -z and parse the output such that S code files are not included in the allFiles variable.

Hope that helps!