Black formatting

Author: tmorrell

caltechdata_api/caltechdata_edit.py

@@ -33,7 +33,6 @@ def caltechdata_accept(ids, token=None, production=False):
     }
 
     for idv in ids:
-
         result = requests.get(
             url + "/api/records/" + idv + "/draft/review", headers=headers
         )

caltechdata_api/caltechdata_write.py

@@ -69,7 +69,7 @@ def add_file_links(
 ):
     # Currently configured for S3 links, assuming all are at same endpoint
     link_string = ""
-    endpoint = "https://"+file_links[0].split("/")[2]
+    endpoint = "https://" + file_links[0].split("/")[2]
     s3 = s3fs.S3FileSystem(anon=True, client_kwargs={"endpoint_url": endpoint})
     index = 0
     for link in file_links:
@@ -102,7 +102,6 @@ def add_file_links(
 
 
 def send_to_community(review_link, data, headers, publish, community, message=None):
-
     if not message:
         message = "This record is submitted automatically with the CaltechDATA API"
 

caltechdata_api/customize_schema.py

@@ -57,7 +57,6 @@ def get_vocabularies():
 
 
 def customize_schema(json_record, schema="43"):
-
     if schema == "43":
         return customize_schema_rdm(json_record)
     else:
@@ -134,7 +133,6 @@ def rdm_creators_contributors(person_list, peopleroles):
 
 
 def customize_schema_rdm(json_record):
-
     # Get vocabularies used in InvenioRDM
     vocabularies = get_vocabularies()
 

caltechdata_api/md_to_json.py

@@ -1,47 +1,46 @@
 import re
 import json
 
+
 class ReadmeFormatException(Exception):
     """Custom exception for errors in the README format."""
 
+
 def camel_case(s):
     """Converts a string to camelCase."""
     s = re.sub(r"(\s|_|-)+", " ", s).title().replace(" ", "")
     return s[0].lower() + s[1:] if s else ""
 
+
 def expand_special_keys(key, value):
     """Expand special keys into their structured format (affiliation, nameIdentifiers)."""
     if key == "affiliation":
-        return [
-            {
-                "affiliationIdentifier": value,
-                "affiliationIdentifierScheme": "ROR"
-            }
-        ]
+        return [{"affiliationIdentifier": value, "affiliationIdentifierScheme": "ROR"}]
     elif key == "nameIdentifiers":
         return [
             {
                 "nameIdentifier": value,
                 "nameIdentifierScheme": "ORCID",
-                "schemeUri": f"https://orcid.org/{value}"
+                "schemeUri": f"https://orcid.org/{value}",
             }
         ]
     return value
 
+
 def parse_readme_to_json(readme_path):
     try:
-        with open(readme_path, 'r') as file:
-            lines = file.read().split('\n')
+        with open(readme_path, "r") as file:
+            lines = file.read().split("\n")
     except IOError as e:
         raise ReadmeFormatException(f"Failed to open or read the file: {e}")
 
     json_data = {}
     current_section = None
     current_object = {}
 
-    section_pattern = re.compile(r'^##\s+(.*)$')
-    key_value_pattern = re.compile(r'^-\s+(.*?):\s+(.*)$')
-    link_pattern = re.compile(r'\[.*?\]\((.*?)\)')
+    section_pattern = re.compile(r"^##\s+(.*)$")
+    key_value_pattern = re.compile(r"^-\s+(.*?):\s+(.*)$")
+    link_pattern = re.compile(r"\[.*?\]\((.*?)\)")
 
     for line_number, line in enumerate(lines, 1):
         if not line.strip():
@@ -93,7 +92,9 @@ def parse_readme_to_json(readme_path):
             current_object[key] = value
 
         elif line.strip() and not section_match:
-            raise ReadmeFormatException(f"Incorrect format detected at line {line_number}: {line}")
+            raise ReadmeFormatException(
+                f"Incorrect format detected at line {line_number}: {line}"
+            )
 
     if current_section and current_object:
         if current_section == "types":
@@ -109,11 +110,12 @@ def parse_readme_to_json(readme_path):
 
     return json_data
 
-readme_path = '/Users/elizabethwon/downloads/exampleREADME.md'
+
+readme_path = "/Users/elizabethwon/downloads/exampleREADME.md"
 try:
     json_data = parse_readme_to_json(readme_path)
-    output_json_path = 'output1.json'
-    with open(output_json_path, 'w') as json_file:
+    output_json_path = "output1.json"
+    with open(output_json_path, "w") as json_file:
         json.dump(json_data, json_file, indent=4)
     print(f"Converted JSON saved to {output_json_path}")
 except ReadmeFormatException as e:

caltechdata_api/utils.py

@@ -54,7 +54,6 @@ def humanbytes(num: Union[int, float], metric: bool = True, precision: int = 1)
 
 
 if __name__ == "__main__":
-
     print(humanbytes(2251799813685247))  # 2 pebibytes
     print(humanbytes(2000000000000000, True))  # 2 petabytes
     print(humanbytes(1099511627776))  # 1 tebibyte